Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC008958.1-201ENST00000511047 682 ntBASIC4.51□□□□□ -1.69
COPB1P53618 MTCYBP43-201ENST00000513621 740 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 IGHV3-32-201ENST00000519182 355 ntBASIC4.51□□□□□ -1.69
COPB1P53618 ARL2BPP5-201ENST00000523141 481 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC239860.2-201ENST00000525886 270 ntBASIC4.51□□□□□ -1.69
COPB1P53618 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.51□□□□□ -1.69
COPB1P53618 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COPB1P53618 AL389895.1-201ENST00000554127 252 ntBASIC4.51□□□□□ -1.69
COPB1P53618 CYCSP2-201ENST00000558168 301 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC074050.1-201ENST00000563247 211 ntBASIC4.51□□□□□ -1.69
COPB1P53618 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.51□□□□□ -1.69
COPB1P53618 AC012065.4-201ENST00000602445 679 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC128687.2-201ENST00000609657 566 ntBASIC4.51□□□□□ -1.69
COPB1P53618 Z99129.1-201ENST00000612510 255 ntBASIC4.51□□□□□ -1.69
COPB1P53618 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB1P53618 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 AL023881.1-201ENST00000621088 301 ntBASIC4.51□□□□□ -1.69
COPB1P53618 MIR6830-201ENST00000636015 70 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 AC005832.2-201ENST00000538921 1430 ntBASIC4.51□□□□□ -1.69
COPB1P53618 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPB1P53618 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPB1P53618 ZNF37BP-203ENST00000452306 1352 ntBASIC4.51□□□□□ -1.69
COPB1P53618 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 AC093536.2-201ENST00000565257 1406 ntBASIC4.5□□□□□ -1.69
COPB1P53618 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.5□□□□□ -1.69
COPB1P53618 AC126755.2-208ENST00000327792 462 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC138969.1-213ENST00000331436 462 ntBASIC4.5□□□□□ -1.69
COPB1P53618 Y_RNA.41-201ENST00000362646 102 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RNA5SP513-201ENST00000364648 118 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 RNU6-517P-201ENST00000384362 110 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RNU6-1215P-201ENST00000384441 102 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RNU6-1122P-201ENST00000384449 107 ntBASIC4.5□□□□□ -1.69
COPB1P53618 MIR92A2-201ENST00000385299 75 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 AL158073.1-201ENST00000426848 1104 ntBASIC4.5□□□□□ -1.69
COPB1P53618 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 AL365184.2-201ENST00000431139 435 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RPL37P1-201ENST00000432310 284 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RPS3AP54-201ENST00000435535 734 ntBASIC4.5□□□□□ -1.69
COPB1P53618 Z74696.2-201ENST00000436514 498 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RPL23AP46-201ENST00000438548 490 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC006011.1-201ENST00000442758 349 ntBASIC4.5□□□□□ -1.69
COPB1P53618 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 SUMO2P2-201ENST00000456482 255 ntBASIC4.5□□□□□ -1.69
COPB1P53618 RPL23AP24-201ENST00000458203 385 ntBASIC4.5□□□□□ -1.69
COPB1P53618 SRRM1P2-201ENST00000464531 1192 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC103987.1-201ENST00000473394 348 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC013828.1-201ENST00000481845 158 ntBASIC4.5□□□□□ -1.69
COPB1P53618 ARL2BPP4-201ENST00000506854 471 ntBASIC4.5□□□□□ -1.69
COPB1P53618 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 CDC42P4-201ENST00000510507 563 ntBASIC4.5□□□□□ -1.69
COPB1P53618 KCTD9P2-201ENST00000512203 1013 ntBASIC4.5□□□□□ -1.69
COPB1P53618 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.5□□□□□ -1.69
COPB1P53618 RN7SKP122-201ENST00000515923 296 ntBASIC4.5□□□□□ -1.69
COPB1P53618 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.5□□□□□ -1.69
COPB1P53618 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AC090502.2-201ENST00000549267 280 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB1P53618 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
COPB1P53618 PCMTD1P2-201ENST00000565017 355 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB1P53618 AC012417.1-201ENST00000582307 1039 ntBASIC4.5□□□□□ -1.69
COPB1P53618 PSMA6P4-201ENST00000603247 718 ntBASIC4.5□□□□□ -1.69
COPB1P53618 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.5□□□□□ -1.69
COPB1P53618 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.5□□□□□ -1.69
COPB1P53618 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 MTCO1P23-201ENST00000415223 1526 ntBASIC4.5□□□□□ -1.69
COPB1P53618 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB1P53618 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 CYP1D1P-201ENST00000416662 1433 ntBASIC4.49□□□□□ -1.69
COPB1P53618 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.49□□□□□ -1.69
COPB1P53618 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 FGF7P2-201ENST00000332473 296 ntBASIC4.49□□□□□ -1.69
COPB1P53618 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 RNU6-501P-201ENST00000364072 100 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms