Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNA5SP235-201ENST00000365411 114 ntBASIC4.58□□□□□ -1.68
NEK3P51956 SNORA62-201ENST00000365493 153 ntBASIC4.58□□□□□ -1.68
NEK3P51956 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 RNU6-629P-201ENST00000384061 103 ntBASIC4.58□□□□□ -1.68
NEK3P51956 MIR659-201ENST00000384963 97 ntBASIC4.58□□□□□ -1.68
NEK3P51956 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NEK3P51956 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 AC009518.2-201ENST00000418056 731 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.58□□□□□ -1.68
NEK3P51956 RPL7AP25-201ENST00000423357 805 ntBASIC4.58□□□□□ -1.68
NEK3P51956 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
NEK3P51956 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 FTH1P6-201ENST00000430768 320 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 AL512286.1-201ENST00000439244 400 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.58□□□□□ -1.68
NEK3P51956 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 SNRPGP5-201ENST00000456003 220 ntBASIC4.58□□□□□ -1.68
NEK3P51956 snoU13.24-201ENST00000458998 104 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC010468.1-201ENST00000461022 817 ntBASIC4.58□□□□□ -1.68
NEK3P51956 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 RPL30P9-201ENST00000465586 330 ntBASIC4.58□□□□□ -1.68
NEK3P51956 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.58□□□□□ -1.68
NEK3P51956 AC021382.1-201ENST00000483523 359 ntBASIC4.58□□□□□ -1.68
NEK3P51956 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 DSTNP2-201ENST00000504533 515 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC103783.1-201ENST00000520506 373 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC109635.4-202ENST00000531666 412 ntBASIC4.58□□□□□ -1.68
NEK3P51956 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.58□□□□□ -1.68
NEK3P51956 AC126177.3-201ENST00000551839 688 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 MIR3915-201ENST00000578518 97 ntBASIC4.58□□□□□ -1.68
NEK3P51956 MIR544B-201ENST00000582372 78 ntBASIC4.58□□□□□ -1.68
NEK3P51956 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 AC090181.2-201ENST00000602975 672 ntBASIC4.58□□□□□ -1.68
NEK3P51956 XIAPP1-201ENST00000603162 600 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC012669.1-201ENST00000603209 283 ntBASIC4.58□□□□□ -1.68
NEK3P51956 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 TUG1_1.1-201ENST00000610654 145 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AL121873.1-201ENST00000616013 524 ntBASIC4.58□□□□□ -1.68
NEK3P51956 AC091931.1-201ENST00000623488 728 ntBASIC4.58□□□□□ -1.68
NEK3P51956 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NEK3P51956 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 AL645937.1-201ENST00000641739 1652 ntBASIC4.57□□□□□ -1.68
NEK3P51956 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.57□□□□□ -1.68
NEK3P51956 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NEK3P51956 AC126755.2-208ENST00000327792 462 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC138969.1-213ENST00000331436 462 ntBASIC4.57□□□□□ -1.68
NEK3P51956 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 RNU6-1207P-201ENST00000384343 107 ntBASIC4.57□□□□□ -1.68
NEK3P51956 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NEK3P51956 U3.22-201ENST00000391120 215 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC025750.1-201ENST00000399891 379 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL049693.1-201ENST00000402760 611 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.57□□□□□ -1.68
NEK3P51956 CCDC58P2-201ENST00000417131 366 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC092647.1-201ENST00000420654 287 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL389915.1-201ENST00000422463 466 ntBASIC4.57□□□□□ -1.68
NEK3P51956 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 ISCA1P2-201ENST00000438679 421 ntBASIC4.57□□□□□ -1.68
NEK3P51956 TPT1P12-201ENST00000448968 492 ntBASIC4.57□□□□□ -1.68
NEK3P51956 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 OR6K1P-201ENST00000456766 971 ntBASIC4.57□□□□□ -1.68
NEK3P51956 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 RPL21P126-201ENST00000470049 478 ntBASIC4.57□□□□□ -1.68
NEK3P51956 MTND3P7-201ENST00000474435 343 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC109486.1-201ENST00000486833 374 ntBASIC4.57□□□□□ -1.68
NEK3P51956 RPS4XP15-201ENST00000489210 795 ntBASIC4.57□□□□□ -1.68
NEK3P51956 OR2A20P-203ENST00000498397 1268 ntBASIC4.57□□□□□ -1.68
NEK3P51956 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 PPBPP1-201ENST00000510807 373 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC093840.1-201ENST00000511599 336 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 SNORA31.20-201ENST00000517111 133 ntBASIC4.57□□□□□ -1.68
NEK3P51956 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 AC087373.1-201ENST00000524920 491 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AP000827.1-201ENST00000527814 258 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.57□□□□□ -1.68
NEK3P51956 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms