Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 AC006557.5-201ENST00000603126 811 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RPSAP75-201ENST00000605848 301 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RNU6-156P-201ENST00000621869 107 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF144AP50876 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
RNF144AP50876 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF144AP50876 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
RNF144AP50876 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF144AP50876 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 Y_RNA.151-201ENST00000363566 112 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 MIR433-201ENST00000384837 93 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RPL23AP17-201ENST00000401064 499 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL138885.1-201ENST00000405921 675 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RNU2-22P-201ENST00000411266 212 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AP000275.1-201ENST00000411943 390 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 RPL7AP51-201ENST00000422016 760 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 BX276092.3-201ENST00000424182 230 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.79□□□□□ -1.48
RNF144AP50876 AC073410.1-201ENST00000435125 589 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF144AP50876 AL356121.1-201ENST00000442911 156 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RPS17P13-201ENST00000448974 407 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AC073476.1-201ENST00000452854 407 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RPL23AP31-201ENST00000456160 467 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RNU7-187P-201ENST00000458985 68 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF144AP50876 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 AC105384.2-201ENST00000508433 640 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 HSD3BP3-201ENST00000514706 994 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 RNU5B-3P-201ENST00000516601 115 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 Y_RNA.703-201ENST00000516846 111 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF144AP50876 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF144AP50876 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.79□□□□□ -1.48
RNF144AP50876 AL670379.6-201ENST00000603753 252 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL670379.1-201ENST00000604752 252 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL670379.5-201ENST00000605253 252 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL670379.8-201ENST00000605353 252 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL670379.7-201ENST00000605823 252 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AC064801.1-201ENST00000612025 407 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AC244100.4-201ENST00000617747 388 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF144AP50876 AL159153.1-201ENST00000619688 317 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AC127459.3-201ENST00000624328 466 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 AL049555.1-201ENST00000562834 1933 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 PWAR1-201ENST00000624188 2414 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF144AP50876 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 SMG1P7-201ENST00000565246 2704 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF144AP50876 AC026523.2-201ENST00000625039 7739 ntBASIC5.79□□□□□ -1.48
RNF144AP50876 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF144AP50876 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
RNF144AP50876 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RNF144AP50876 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 CASC19-246ENST00000641625 1606 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RNF144AP50876 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 RNU6-1159P-201ENST00000362933 107 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 RNU6-1284P-201ENST00000363701 100 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 Y_RNA.274-201ENST00000364714 101 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 Y_RNA.464-201ENST00000384282 110 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF144AP50876 UBE2V1P4-201ENST00000425374 344 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 EZH2P1-201ENST00000431167 291 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 MYL8P-204ENST00000431574 518 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 OR3D1P-201ENST00000438288 955 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 RPS27AP3-201ENST00000453803 454 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 PCMTD1P1-201ENST00000455560 355 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF144AP50876 LINC01399-202ENST00000458450 244 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 AC006511.1-201ENST00000470614 315 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
RNF144AP50876 AP000926.1-201ENST00000479573 241 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms