Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.27□□□□□ -1.57
MRE11P49959 AC098824.1-201ENST00000453565 980 ntBASIC5.27□□□□□ -1.57
MRE11P49959 SNORA59A-201ENST00000459326 152 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC011352.3-201ENST00000505162 593 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.27□□□□□ -1.57
MRE11P49959 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RN7SKP260-201ENST00000516907 149 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC023632.4-201ENST00000517783 191 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.27□□□□□ -1.57
MRE11P49959 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 ADI1P3-201ENST00000549509 470 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 NMNAT1P1-201ENST00000554095 876 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL121579.1-201ENST00000555129 305 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.27□□□□□ -1.57
MRE11P49959 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.27□□□□□ -1.57
MRE11P49959 AC136618.2-201ENST00000575091 400 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL596327.1-201ENST00000603629 213 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL161756.2-201ENST00000604597 246 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL353621.2-201ENST00000605340 133 ntBASIC5.27□□□□□ -1.57
MRE11P49959 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.27□□□□□ -1.57
MRE11P49959 AC055764.2-201ENST00000610089 670 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC092794.2-201ENST00000620933 563 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MRE11P49959 AC079228.1-201ENST00000624774 1049 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AC018555.1-201ENST00000567548 1980 ntBASIC5.27□□□□□ -1.57
MRE11P49959 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
MRE11P49959 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MRE11P49959 RNF6P1-201ENST00000444889 1784 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.26□□□□□ -1.57
MRE11P49959 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.26□□□□□ -1.57
MRE11P49959 RNU6-492P-201ENST00000363035 104 ntBASIC5.26□□□□□ -1.57
MRE11P49959 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
MRE11P49959 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 OR52E6-202ENST00000379946 954 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AL139098.1-201ENST00000407291 389 ntBASIC5.26□□□□□ -1.57
MRE11P49959 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 JKAMPP1-201ENST00000413804 919 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.26□□□□□ -1.57
MRE11P49959 AL732292.1-201ENST00000426692 226 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 RPL23AP25-201ENST00000430973 463 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.26□□□□□ -1.57
MRE11P49959 RHOT1P3-201ENST00000436571 331 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 RPL7P31-201ENST00000450192 724 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 RNU6-1218P-201ENST00000458990 108 ntBASIC5.26□□□□□ -1.57
MRE11P49959 SNORD42A-201ENST00000459584 64 ntBASIC5.26□□□□□ -1.57
MRE11P49959 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 AC105252.1-201ENST00000503089 286 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 HMGB1P28-201ENST00000507778 552 ntBASIC5.26□□□□□ -1.57
MRE11P49959 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
MRE11P49959 MTCO1P30-201ENST00000515244 580 ntBASIC5.26□□□□□ -1.57
MRE11P49959 RNU6-314P-201ENST00000516574 104 ntBASIC5.26□□□□□ -1.57
MRE11P49959 RNU6-1261P-201ENST00000517194 104 ntBASIC5.26□□□□□ -1.57
MRE11P49959 MIR2116-201ENST00000517221 80 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 AC004217.3-201ENST00000551552 878 ntBASIC5.26□□□□□ -1.57
MRE11P49959 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.26□□□□□ -1.57
MRE11P49959 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 AC022884.3-201ENST00000579571 248 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC098614.4-201ENST00000607601 462 ntBASIC5.26□□□□□ -1.57
MRE11P49959 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC091304.9-201ENST00000612091 226 ntBASIC5.26□□□□□ -1.57
MRE11P49959 MIR7973-1-201ENST00000614683 76 ntBASIC5.26□□□□□ -1.57
MRE11P49959 CR381653.2-201ENST00000624041 768 ntBASIC5.26□□□□□ -1.57
MRE11P49959 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 AP003400.5-201ENST00000624827 617 ntBASIC5.26□□□□□ -1.57
MRE11P49959 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
MRE11P49959 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
MRE11P49959 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.26□□□□□ -1.57
MRE11P49959 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
MRE11P49959 OR5BR1P-201ENST00000524992 1330 ntBASIC5.25□□□□□ -1.57
MRE11P49959 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 AC015813.6-201ENST00000624409 5808 ntBASIC5.25□□□□□ -1.57
MRE11P49959 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 AC009951.1-201ENST00000623674 2614 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms