Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 RNA5SP119-201ENST00000362715 117 ntBASIC3.85□□□□□ -1.79
LHX1P48742 RNA5SP171-201ENST00000391071 115 ntBASIC3.85□□□□□ -1.79
LHX1P48742 HMGN2P8-201ENST00000391458 268 ntBASIC3.85□□□□□ -1.79
LHX1P48742 MIR1250-201ENST00000408098 113 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.85□□□□□ -1.79
LHX1P48742 HMGN2P31-201ENST00000432430 273 ntBASIC3.85□□□□□ -1.79
LHX1P48742 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
LHX1P48742 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.85□□□□□ -1.79
LHX1P48742 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 USP9YP25-201ENST00000457708 443 ntBASIC3.85□□□□□ -1.79
LHX1P48742 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.85□□□□□ -1.79
LHX1P48742 AC110768.1-201ENST00000509222 400 ntBASIC3.85□□□□□ -1.79
LHX1P48742 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 RN7SKP31-201ENST00000516354 278 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
LHX1P48742 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 AC022662.1-201ENST00000580252 331 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC006116.10-201ENST00000591836 581 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 AC013244.3-201ENST00000605614 388 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 AC092354.2-201ENST00000607786 514 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AL513477.2-201ENST00000607858 568 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC006065.5-201ENST00000623427 349 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AL732372.2-225ENST00000642124 456 ntBASIC3.85□□□□□ -1.79
LHX1P48742 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.85□□□□□ -1.79
LHX1P48742 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.85□□□□□ -1.79
LHX1P48742 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.85□□□□□ -1.79
LHX1P48742 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
LHX1P48742 AC130650.2-201ENST00000618736 2403 ntBASIC3.84□□□□□ -1.79
LHX1P48742 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.84□□□□□ -1.79
LHX1P48742 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
LHX1P48742 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LHX1P48742 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 MIR218-2-201ENST00000385006 110 ntBASIC3.84□□□□□ -1.79
LHX1P48742 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.84□□□□□ -1.79
LHX1P48742 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 ELOCP9-201ENST00000418624 239 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL590399.6-201ENST00000446396 307 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL358232.1-201ENST00000448030 501 ntBASIC3.84□□□□□ -1.79
LHX1P48742 OFD1P3Y-201ENST00000453312 783 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL133477.1-201ENST00000457472 514 ntBASIC3.84□□□□□ -1.79
LHX1P48742 RPL7L1P8-201ENST00000469911 741 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL136126.1-201ENST00000473603 402 ntBASIC3.84□□□□□ -1.79
LHX1P48742 OR4G11P-201ENST00000492842 939 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
LHX1P48742 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
LHX1P48742 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.84□□□□□ -1.79
LHX1P48742 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 AP000926.4-201ENST00000527351 454 ntBASIC3.84□□□□□ -1.79
LHX1P48742 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 AC008127.2-201ENST00000549925 1075 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC023161.2-201ENST00000551218 780 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL389895.1-201ENST00000554127 252 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC005412.1-201ENST00000580812 1049 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.84□□□□□ -1.79
LHX1P48742 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.84□□□□□ -1.79
LHX1P48742 BNIP3P33-201ENST00000598912 569 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.84□□□□□ -1.79
LHX1P48742 AC091057.2-201ENST00000602594 792 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC025588.3-201ENST00000604182 274 ntBASIC3.84□□□□□ -1.79
LHX1P48742 U3.45-201ENST00000607547 219 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC007349.4-201ENST00000608114 532 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL451074.6-201ENST00000608512 729 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AP001521.1-201ENST00000609150 300 ntBASIC3.84□□□□□ -1.79
LHX1P48742 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AL391261.4-201ENST00000616012 481 ntBASIC3.84□□□□□ -1.79
LHX1P48742 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC231759.1-201ENST00000616455 597 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC109809.1-201ENST00000619665 545 ntBASIC3.84□□□□□ -1.79
LHX1P48742 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LHX1P48742 AC243312.2-201ENST00000623340 601 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AP003355.3-201ENST00000623465 114 ntBASIC3.84□□□□□ -1.79
LHX1P48742 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
LHX1P48742 AC092184.1-201ENST00000625042 715 ntBASIC3.84□□□□□ -1.79
LHX1P48742 AC008993.2-201ENST00000631744 806 ntBASIC3.84□□□□□ -1.79
LHX1P48742 CDR1-202ENST00000625883 1485 ntBASIC3.84□□□□□ -1.8
LHX1P48742 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LHX1P48742 MTCO1P24-201ENST00000515438 1558 ntBASIC3.84□□□□□ -1.8
LHX1P48742 NCAPGP1-201ENST00000505112 1814 ntBASIC3.84□□□□□ -1.8
LHX1P48742 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.84□□□□□ -1.8
LHX1P48742 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms