Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC124293.1-201ENST00000530034 493 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX3P48380 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX3P48380 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX3P48380 AC022069.1-201ENST00000582910 658 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX3P48380 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX3P48380 AC103881.1-201ENST00000603476 538 ntBASIC3.16□□□□□ -1.9
RFX3P48380 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC013468.1-201ENST00000608680 598 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
RFX3P48380 AC098679.5-201ENST00000624394 571 ntBASIC3.16□□□□□ -1.9
RFX3P48380 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX3P48380 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX3P48380 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX3P48380 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
RFX3P48380 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX3P48380 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
RFX3P48380 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFX3P48380 MTND4P34-201ENST00000572715 1371 ntBASIC3.15□□□□□ -1.9
RFX3P48380 AC117529.2-201ENST00000512159 2068 ntBASIC3.15□□□□□ -1.9
RFX3P48380 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFX3P48380 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
RFX3P48380 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
RFX3P48380 RSL24D1P1-201ENST00000404972 493 ntBASIC3.15□□□□□ -1.91
RFX3P48380 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RFX3P48380 PTGES3P2-201ENST00000407942 482 ntBASIC3.15□□□□□ -1.91
RFX3P48380 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
RFX3P48380 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX3P48380 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.15□□□□□ -1.91
RFX3P48380 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.15□□□□□ -1.91
RFX3P48380 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX3P48380 AC096632.1-201ENST00000427395 310 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AL590762.3-201ENST00000436372 640 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFX3P48380 AC008264.1-201ENST00000447612 367 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
RFX3P48380 HMGB1P15-201ENST00000453854 435 ntBASIC3.15□□□□□ -1.91
RFX3P48380 GTF2IP12-201ENST00000456547 356 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC008379.1-201ENST00000463655 464 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AL136126.1-201ENST00000473603 402 ntBASIC3.15□□□□□ -1.91
RFX3P48380 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX3P48380 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
RFX3P48380 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 PHBP14-201ENST00000512887 367 ntBASIC3.15□□□□□ -1.91
RFX3P48380 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
RFX3P48380 HMGN1P15-201ENST00000513870 295 ntBASIC3.15□□□□□ -1.91
RFX3P48380 DUXAP2-201ENST00000519198 589 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 HMGB1P1-201ENST00000522557 636 ntBASIC3.15□□□□□ -1.91
RFX3P48380 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.15□□□□□ -1.91
RFX3P48380 AP003385.6-201ENST00000531603 374 ntBASIC3.15□□□□□ -1.91
RFX3P48380 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFX3P48380 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX3P48380 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX3P48380 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.15□□□□□ -1.91
RFX3P48380 RN7SL622P-201ENST00000585292 275 ntBASIC3.15□□□□□ -1.91
RFX3P48380 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX3P48380 XIAPP1-201ENST00000603162 600 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC009948.4-201ENST00000604692 675 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC090116.1-201ENST00000615679 446 ntBASIC3.15□□□□□ -1.91
RFX3P48380 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.15□□□□□ -1.91
RFX3P48380 AC006963.1-201ENST00000624003 1052 ntBASIC3.15□□□□□ -1.91
RFX3P48380 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.15□□□□□ -1.91
RFX3P48380 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFX3P48380 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RFX3P48380 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX3P48380 AC073055.1-201ENST00000456901 1621 ntBASIC3.15□□□□□ -1.91
RFX3P48380 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX3P48380 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
RFX3P48380 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX3P48380 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RFX3P48380 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX3P48380 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RFX3P48380 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX3P48380 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX3P48380 RNA5SP258-201ENST00000362750 119 ntBASIC3.14□□□□□ -1.91
RFX3P48380 RNU6-1181P-201ENST00000384191 106 ntBASIC3.14□□□□□ -1.91
RFX3P48380 RNU6-921P-201ENST00000384361 107 ntBASIC3.14□□□□□ -1.91
RFX3P48380 MIR649-201ENST00000384843 97 ntBASIC3.14□□□□□ -1.91
RFX3P48380 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RFX3P48380 SNORD65C-201ENST00000390962 71 ntBASIC3.14□□□□□ -1.91
RFX3P48380 RNU6-837P-201ENST00000391056 108 ntBASIC3.14□□□□□ -1.91
RFX3P48380 RNU2-72P-201ENST00000411175 163 ntBASIC3.14□□□□□ -1.91
RFX3P48380 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX3P48380 AIMP1P1-201ENST00000418670 937 ntBASIC3.14□□□□□ -1.91
RFX3P48380 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
RFX3P48380 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX3P48380 BX890604.2-201ENST00000427883 474 ntBASIC3.14□□□□□ -1.91
RFX3P48380 AP000907.1-201ENST00000428428 510 ntBASIC3.14□□□□□ -1.91
RFX3P48380 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX3P48380 AC092641.1-201ENST00000440229 772 ntBASIC3.14□□□□□ -1.91
RFX3P48380 MOB1AP2-201ENST00000446060 614 ntBASIC3.14□□□□□ -1.91
RFX3P48380 AC104073.1-201ENST00000451988 151 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms