Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.46□□□□□ -1.85
NKX2-1P43699 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
NKX2-1P43699 CR381670.1-201ENST00000624291 1693 ntBASIC3.46□□□□□ -1.85
NKX2-1P43699 AL157700.1-201ENST00000561973 1432 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC103591.2-201ENST00000265259 766 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX2-1P43699 RPL21P132-201ENST00000331267 462 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU6-433P-201ENST00000363216 104 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNA5SP175-201ENST00000364275 119 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU4-91P-201ENST00000364778 135 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 Y_RNA.302-201ENST00000364997 102 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU6-253P-201ENST00000384730 105 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC097374.1-203ENST00000400783 485 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU6-920P-201ENST00000410926 92 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 SNRPFP1-201ENST00000414761 252 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC083875.1-201ENST00000419509 405 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC099677.1-201ENST00000420575 175 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC104837.2-201ENST00000427236 424 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AL356535.1-201ENST00000440335 398 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 Z95327.1-201ENST00000446082 482 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC092324.1-201ENST00000468671 324 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RPL31P50-201ENST00000471002 296 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC092045.1-201ENST00000495716 1231 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 BNIP3P41-201ENST00000503774 571 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC005921.1-201ENST00000510589 286 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 RNU6-27P-201ENST00000516146 107 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 IGKV2-38-201ENST00000517443 247 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-1P43699 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 OR5D15P-201ENST00000531671 942 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AP006289.1-201ENST00000538089 277 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC063950.1-201ENST00000552036 308 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC024909.2-201ENST00000553035 286 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 SNRPGP15-201ENST00000600149 222 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC025946.2-201ENST00000603398 234 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 HMGB1P50-201ENST00000605814 607 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 HMGN2P28-201ENST00000606102 262 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC106028.5-201ENST00000610332 395 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC084782.3-201ENST00000612282 578 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 uc_338.32-201ENST00000615087 172 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AL021997.2-201ENST00000615674 271 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 Z69908.1-201ENST00000622603 247 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC040168.1-201ENST00000623594 991 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AF246928.1-201ENST00000623768 87 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-1P43699 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-1P43699 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-1P43699 ZNF833P-201ENST00000424938 1494 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX2-1P43699 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 AL049780.3-201ENST00000624612 1583 ntBASIC3.46□□□□□ -1.86
NKX2-1P43699 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-1P43699 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NKX2-1P43699 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NKX2-1P43699 RNA5SP258-201ENST00000362750 119 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 SNORA7.2-201ENST00000364446 145 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 RNA5SP167-201ENST00000365461 116 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-1P43699 RNU1-89P-201ENST00000384592 164 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 RN7SKP266-201ENST00000410232 287 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-1P43699 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms