Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NPM1P13-201ENST00000452663 865 ntBASIC3.56□□□□□ -1.84
SSR1P43307 RPS24P6-201ENST00000452670 400 ntBASIC3.56□□□□□ -1.84
SSR1P43307 MTND2P30-201ENST00000456663 382 ntBASIC3.56□□□□□ -1.84
SSR1P43307 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.56□□□□□ -1.84
SSR1P43307 RN7SL499P-201ENST00000481141 276 ntBASIC3.56□□□□□ -1.84
SSR1P43307 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
SSR1P43307 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSR1P43307 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.56□□□□□ -1.84
SSR1P43307 SERPINE4P-201ENST00000554978 281 ntBASIC3.56□□□□□ -1.84
SSR1P43307 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.56□□□□□ -1.84
SSR1P43307 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
SSR1P43307 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SSR1P43307 AC113368.1-201ENST00000603736 382 ntBASIC3.56□□□□□ -1.84
SSR1P43307 KATNBL1P5-201ENST00000605015 517 ntBASIC3.56□□□□□ -1.84
SSR1P43307 AC008962.1-201ENST00000605729 304 ntBASIC3.56□□□□□ -1.84
SSR1P43307 AC021851.1-201ENST00000608537 1082 ntBASIC3.56□□□□□ -1.84
SSR1P43307 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
SSR1P43307 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
SSR1P43307 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.56□□□□□ -1.84
SSR1P43307 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSR1P43307 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSR1P43307 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
SSR1P43307 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSR1P43307 AC092447.7-201ENST00000422212 1621 ntBASIC3.55□□□□□ -1.84
SSR1P43307 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSR1P43307 RNU4-35P-201ENST00000362588 141 ntBASIC3.55□□□□□ -1.84
SSR1P43307 RNU6-263P-201ENST00000363811 107 ntBASIC3.55□□□□□ -1.84
SSR1P43307 RNU6-1243P-201ENST00000364028 107 ntBASIC3.55□□□□□ -1.84
SSR1P43307 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSR1P43307 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
SSR1P43307 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSR1P43307 RN7SKP58-201ENST00000411010 305 ntBASIC3.55□□□□□ -1.84
SSR1P43307 RNU6-272P-201ENST00000411028 104 ntBASIC3.55□□□□□ -1.84
SSR1P43307 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 YPEL5P1-201ENST00000419731 367 ntBASIC3.55□□□□□ -1.84
SSR1P43307 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 AC073508.1-201ENST00000428866 656 ntBASIC3.55□□□□□ -1.84
SSR1P43307 SNRPEP4-201ENST00000435815 279 ntBASIC3.55□□□□□ -1.84
SSR1P43307 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 RRM2P4-201ENST00000441721 562 ntBASIC3.55□□□□□ -1.84
SSR1P43307 Z77249.1-201ENST00000444622 1175 ntBASIC3.55□□□□□ -1.84
SSR1P43307 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
SSR1P43307 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
SSR1P43307 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.55□□□□□ -1.84
SSR1P43307 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 AC008885.2-201ENST00000509506 930 ntBASIC3.55□□□□□ -1.84
SSR1P43307 SETP12-201ENST00000514068 805 ntBASIC3.55□□□□□ -1.84
SSR1P43307 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSR1P43307 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.55□□□□□ -1.84
SSR1P43307 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.55□□□□□ -1.84
SSR1P43307 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.55□□□□□ -1.84
SSR1P43307 AC015917.1-201ENST00000579654 510 ntBASIC3.55□□□□□ -1.84
SSR1P43307 AC008507.1-201ENST00000587506 734 ntBASIC3.55□□□□□ -1.84
SSR1P43307 AL162713.1-201ENST00000604480 262 ntBASIC3.55□□□□□ -1.84
SSR1P43307 AC096586.1-201ENST00000610267 561 ntBASIC3.55□□□□□ -1.84
SSR1P43307 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.55□□□□□ -1.84
SSR1P43307 AC084035.1-201ENST00000634543 607 ntBASIC3.55□□□□□ -1.84
SSR1P43307 AC009093.8-201ENST00000641769 292 ntBASIC3.55□□□□□ -1.84
SSR1P43307 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SSR1P43307 Z83843.1-201ENST00000604070 3685 ntBASIC3.55□□□□□ -1.84
SSR1P43307 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
SSR1P43307 RNU6-792P-201ENST00000363490 107 ntBASIC3.54□□□□□ -1.84
SSR1P43307 RNU6-1339P-201ENST00000363574 91 ntBASIC3.54□□□□□ -1.84
SSR1P43307 RNU6-629P-201ENST00000384061 103 ntBASIC3.54□□□□□ -1.84
SSR1P43307 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SSR1P43307 BX890604.2-201ENST00000427883 474 ntBASIC3.54□□□□□ -1.84
SSR1P43307 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC010881.1-201ENST00000433830 235 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.54□□□□□ -1.84
SSR1P43307 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.54□□□□□ -1.84
SSR1P43307 Z96811.1-201ENST00000445880 108 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC007967.1-201ENST00000455422 1159 ntBASIC3.54□□□□□ -1.84
SSR1P43307 snoU13.24-201ENST00000458998 104 ntBASIC3.54□□□□□ -1.84
SSR1P43307 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC106707.2-201ENST00000484182 374 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.54□□□□□ -1.84
SSR1P43307 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.54□□□□□ -1.84
SSR1P43307 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
SSR1P43307 SNORA31.1-201ENST00000515993 133 ntBASIC3.54□□□□□ -1.84
SSR1P43307 SNORA31.5-201ENST00000516190 133 ntBASIC3.54□□□□□ -1.84
SSR1P43307 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.54□□□□□ -1.84
SSR1P43307 OSBPL9P3-201ENST00000534523 595 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC125611.2-201ENST00000551907 647 ntBASIC3.54□□□□□ -1.84
SSR1P43307 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.54□□□□□ -1.84
SSR1P43307 DNAJC8P1-201ENST00000554535 372 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.54□□□□□ -1.84
SSR1P43307 AC090312.2-201ENST00000582687 378 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.54□□□□□ -1.84
SSR1P43307 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
SSR1P43307 RPL23AP88-201ENST00000605759 454 ntBASIC3.54□□□□□ -1.84
SSR1P43307 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AC006963.1-201ENST00000624003 1052 ntBASIC3.54□□□□□ -1.84
SSR1P43307 AL109659.3-201ENST00000624985 950 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms