Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.89□□□□□ -1.95
CD40LGP29965 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.89□□□□□ -1.95
CD40LGP29965 AC106785.1-201ENST00000565935 262 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 AC005412.1-201ENST00000580812 1049 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 AC017100.2-201ENST00000584628 355 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.89□□□□□ -1.95
CD40LGP29965 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.89□□□□□ -1.95
CD40LGP29965 XIAPP1-201ENST00000603162 600 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 AC010591.1-201ENST00000603941 649 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 DPRXP5-201ENST00000604662 539 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 U3.45-201ENST00000607547 219 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.89□□□□□ -1.95
CD40LGP29965 AL356863.1-201ENST00000623378 1080 ntBASIC2.89□□□□□ -1.95
CD40LGP29965 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.89□□□□□ -1.95
CD40LGP29965 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
CD40LGP29965 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD40LGP29965 RNA5SP515-201ENST00000364570 118 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.88□□□□□ -1.95
CD40LGP29965 RNA5SP38-201ENST00000410750 119 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 CYCSP19-201ENST00000411715 316 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 AL606495.1-201ENST00000422100 813 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.88□□□□□ -1.95
CD40LGP29965 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.88□□□□□ -1.95
CD40LGP29965 NOTCH2P1-201ENST00000443481 624 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC112198.1-201ENST00000505369 1220 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.88□□□□□ -1.95
CD40LGP29965 AL391156.1-201ENST00000554965 554 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.88□□□□□ -1.95
CD40LGP29965 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.88□□□□□ -1.95
CD40LGP29965 uc_338.1-201ENST00000612113 180 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 U4.6-201ENST00000621618 127 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 AC095031.1-201ENST00000623685 672 ntBASIC2.88□□□□□ -1.95
CD40LGP29965 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD40LGP29965 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD40LGP29965 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.88□□□□□ -1.95
CD40LGP29965 AL161912.2-201ENST00000565707 3007 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CD40LGP29965 RNA5SP197-201ENST00000363357 119 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 RNU6-799P-201ENST00000363567 107 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CD40LGP29965 RNU6-339P-201ENST00000384310 107 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 DHFRP5-201ENST00000406944 564 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.87□□□□□ -1.95
CD40LGP29965 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 AL035423.1-201ENST00000420331 213 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 DUTP6-201ENST00000425573 462 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AL445528.1-201ENST00000426330 420 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 KCTD10P1-201ENST00000434203 625 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 MTCYBP34-201ENST00000439552 670 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.87□□□□□ -1.95
CD40LGP29965 AC026402.1-201ENST00000513642 170 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 GMPSP1-201ENST00000514075 579 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.87□□□□□ -1.95
CD40LGP29965 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CD40LGP29965 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 AL355812.1-201ENST00000603215 216 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AC096947.1-201ENST00000603233 470 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AC128687.1-201ENST00000605304 619 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AL355810.1-201ENST00000614629 552 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AL360181.4-201ENST00000621752 134 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.87□□□□□ -1.95
CD40LGP29965 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.87□□□□□ -1.95
CD40LGP29965 Z83843.1-201ENST00000604070 3685 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
CD40LGP29965 CR383658.2-201ENST00000547576 1525 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 AC233263.6-201ENST00000631132 1963 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 SGO1P2-201ENST00000429458 1589 ntBASIC2.87□□□□□ -1.95
CD40LGP29965 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
CD40LGP29965 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CD40LGP29965 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CD40LGP29965 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.86□□□□□ -1.95
CD40LGP29965 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD40LGP29965 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD40LGP29965 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 RNU6-1226P-201ENST00000384317 107 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 PTMAP2-201ENST00000397627 327 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 AC025750.1-201ENST00000399891 379 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD40LGP29965 SSXP9-201ENST00000417503 292 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 DBIP2-201ENST00000419076 262 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 CDC27P1-201ENST00000445384 715 ntBASIC2.86□□□□□ -1.95
CD40LGP29965 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD40LGP29965 AL359073.1-201ENST00000448036 403 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms