Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRMP28827 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRMP28827 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRMP28827 SNORA35B-201ENST00000607417 129 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRMP28827 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRMP28827 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRMP28827 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.79□□□□□ -1.8
PTPRMP28827 RPL23AP31-201ENST00000456160 467 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 RPL23AP42-201ENST00000471152 471 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 AP001086.1-201ENST00000494882 321 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPRMP28827 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 AC245166.1-201ENST00000521012 253 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 ZNF861P-201ENST00000588126 639 ntBASIC3.79□□□□□ -1.8
PTPRMP28827 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRMP28827 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPRMP28827 MIR26A1-201ENST00000362205 77 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 SNORA80E-201ENST00000384744 137 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 MIR137-201ENST00000385223 102 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 AL450263.2-201ENST00000439400 589 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 AC092851.1-201ENST00000535964 478 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.78□□□□□ -1.8
PTPRMP28827 OR4U1P-201ENST00000554958 912 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPRMP28827 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPRMP28827 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.78□□□□□ -1.8
PTPRMP28827 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTPRMP28827 AC022336.2-201ENST00000568966 2538 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 AL356292.1-201ENST00000283110 373 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 RPL21P3-201ENST00000395517 478 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 RPLP0P7-201ENST00000416050 667 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPRMP28827 GOLGA5P1-201ENST00000507317 980 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 AP001317.1-201ENST00000531194 960 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPRMP28827 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPRMP28827 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPRMP28827 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPRMP28827 AC009318.2-201ENST00000610917 651 ntBASIC3.77□□□□□ -1.81
PTPRMP28827 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPRMP28827 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRMP28827 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PTPRMP28827 AL024474.1-201ENST00000404655 591 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 ST13P20-201ENST00000447996 1065 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 AC125238.1-201ENST00000448842 249 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPRMP28827 HPRT1P3-201ENST00000539521 576 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPRMP28827 MTCYBP28-201ENST00000566728 1132 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.76□□□□□ -1.81
PTPRMP28827 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPRMP28827 AC090115.4-201ENST00000609970 188 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPRMP28827 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPRMP28827 AL359715.4-201ENST00000606629 1436 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 AL353743.4-201ENST00000422653 1547 ntBASIC3.76□□□□□ -1.81
PTPRMP28827 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPRMP28827 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPRMP28827 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.75□□□□□ -1.81
PTPRMP28827 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPRMP28827 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPRMP28827 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
PTPRMP28827 AC008277.2-201ENST00000605196 797 ntBASIC3.75□□□□□ -1.81
PTPRMP28827 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPRMP28827 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PTPRMP28827 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPRMP28827 AL512646.1-201ENST00000269395 1077 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 RNA5SP213-201ENST00000391031 106 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AL359511.1-201ENST00000402970 211 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AL451074.5-201ENST00000415894 435 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPRMP28827 RPL31P45-201ENST00000419532 356 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 Z99127.2-201ENST00000441426 334 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AC011753.1-201ENST00000451001 220 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AL354710.1-201ENST00000453641 246 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AC117522.2-201ENST00000510049 657 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPRMP28827 AC068657.1-201ENST00000520807 306 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.74□□□□□ -1.81
PTPRMP28827 TRAV11-201ENST00000539512 339 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 AC103810.6-201ENST00000606708 136 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPRMP28827 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPRMP28827 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PTPRMP28827 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPRMP28827 MTND5P6-201ENST00000422338 1798 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPRMP28827 TTC39DP-201ENST00000416781 1688 ntBASIC3.74□□□□□ -1.81
PTPRMP28827 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPRMP28827 AC109315.1-201ENST00000584143 1347 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms