Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC006548.1-201ENST00000427470 102 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 RPS29P7-201ENST00000439662 171 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 BTBD7P2-201ENST00000441962 620 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 RPS12P18-201ENST00000442381 270 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 PLGLA-201ENST00000465668 449 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 NDUFA5P9-201ENST00000472609 340 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 RPL23AP11-201ENST00000475260 469 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 RPL7P23-201ENST00000493874 747 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 KLHL2P1-201ENST00000508691 521 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC008565.1-201ENST00000509046 885 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 MTCO1P35-201ENST00000515270 228 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC104057.1-201ENST00000515547 497 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AL121603.1-201ENST00000553815 142 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC233266.2-201ENST00000567067 528 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 MIR5685-201ENST00000579080 79 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 MIR4286-201ENST00000580651 93 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC017100.2-201ENST00000584628 355 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC015849.2-201ENST00000605738 409 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 U3.45-201ENST00000607547 219 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC099676.1-201ENST00000608886 657 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AC090912.3-201ENST00000609775 533 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 AL354696.1-201ENST00000614652 497 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 CR381572.1-201ENST00000625098 102 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 FRG1DP-201ENST00000635586 771 ntBASIC2.77□□□□□ -1.97
HLA-DMAP28067 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
HLA-DMAP28067 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DMAP28067 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 RNU6-263P-201ENST00000363811 107 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 RNU6-1027P-201ENST00000383998 107 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 RNU6-796P-201ENST00000391086 107 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 UBE2V1P15-201ENST00000407776 448 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 RNU2-17P-201ENST00000410290 190 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AL035423.1-201ENST00000420331 213 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 RPL36P19-201ENST00000430744 301 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 MTCYBP34-201ENST00000439552 670 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 RN7SL132P-201ENST00000478131 296 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DMAP28067 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC092470.1-201ENST00000546187 132 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC005476.1-201ENST00000554427 397 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 HSPE1P5-201ENST00000561489 272 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 RN7SL703P-201ENST00000578485 302 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 COX6CP3-201ENST00000580869 223 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC083760.1-201ENST00000589621 670 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC092474.3-201ENST00000603022 568 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 BX323046.1-201ENST00000610145 535 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 MIR7851-201ENST00000610611 160 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC127502.3-201ENST00000636170 1206 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DMAP28067 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DMAP28067 AC091564.4-201ENST00000533934 2194 ntBASIC2.76□□□□□ -1.97
HLA-DMAP28067 AL589826.1-201ENST00000340697 249 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 RPL32P3-201ENST00000359025 275 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 RNU6-799P-201ENST00000363567 107 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 CD24P4-201ENST00000382840 243 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 U8.11-201ENST00000384699 133 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 U8.12-201ENST00000384701 133 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AL049693.1-201ENST00000402760 611 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 ATF1P1-201ENST00000406040 927 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 RNU4-78P-201ENST00000410940 126 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AL807761.1-201ENST00000417622 171 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 UBE2D3P2-201ENST00000424409 445 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DMAP28067 AC016712.1-201ENST00000431088 378 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AC004865.1-201ENST00000442276 1003 ntBASIC2.75□□□□□ -1.97
HLA-DMAP28067 AC007000.2-201ENST00000442564 487 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms