Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MKKS-204ENST00000639674 192 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 OR4A15-201ENST00000314706 1035 ntBASIC3.81□□□□□ -1.8
CDH3P22223 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDH3P22223 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
CDH3P22223 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDH3P22223 RNU6-441P-201ENST00000384545 106 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MIR554-201ENST00000384874 96 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MIR134-201ENST00000385258 73 ntBASIC3.81□□□□□ -1.8
CDH3P22223 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 RPL36AP36-201ENST00000418616 301 ntBASIC3.81□□□□□ -1.8
CDH3P22223 RPS15AP40-201ENST00000419621 391 ntBASIC3.81□□□□□ -1.8
CDH3P22223 Z97055.1-201ENST00000419730 712 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC005005.2-201ENST00000420779 380 ntBASIC3.81□□□□□ -1.8
CDH3P22223 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDH3P22223 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH3P22223 USP9YP11-201ENST00000427537 717 ntBASIC3.81□□□□□ -1.8
CDH3P22223 PSMA2P3-201ENST00000429685 675 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MTATP6P17-201ENST00000431030 672 ntBASIC3.81□□□□□ -1.8
CDH3P22223 RPL21P112-201ENST00000434403 463 ntBASIC3.81□□□□□ -1.8
CDH3P22223 SETP5-201ENST00000437270 562 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC241584.1-201ENST00000438469 1241 ntBASIC3.81□□□□□ -1.8
CDH3P22223 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 AC098826.2-201ENST00000452011 651 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 MTCO3P16-201ENST00000454456 754 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL136097.1-201ENST00000456945 913 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH3P22223 OR9M1P-201ENST00000459641 921 ntBASIC3.81□□□□□ -1.8
CDH3P22223 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH3P22223 AL139099.1-201ENST00000497398 403 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC034244.1-201ENST00000507687 207 ntBASIC3.81□□□□□ -1.8
CDH3P22223 FABP5P12-201ENST00000515543 389 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH3P22223 IGKV2-38-201ENST00000517443 247 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AP001189.2-201ENST00000527320 189 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH3P22223 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH3P22223 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 NBEAP1-201ENST00000554452 979 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MTCYBP27-201ENST00000555160 670 ntBASIC3.81□□□□□ -1.8
CDH3P22223 TRAV15-201ENST00000556680 249 ntBASIC3.81□□□□□ -1.8
CDH3P22223 HSPE1P5-201ENST00000561489 272 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL132657.2-201ENST00000564417 358 ntBASIC3.81□□□□□ -1.8
CDH3P22223 MTCYBP28-201ENST00000566728 1132 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC022968.1-201ENST00000567372 442 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH3P22223 SNORD39.3-201ENST00000584451 71 ntBASIC3.81□□□□□ -1.8
CDH3P22223 VN1R78P-201ENST00000597393 564 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL390838.2-201ENST00000602394 274 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AL451074.6-201ENST00000608512 729 ntBASIC3.81□□□□□ -1.8
CDH3P22223 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
CDH3P22223 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
CDH3P22223 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CDH3P22223 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH3P22223 AC117529.2-201ENST00000512159 2068 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC011978.2-201ENST00000569835 2054 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC091152.2-201ENST00000591628 2569 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH3P22223 AC138915.3-201ENST00000562908 1389 ntBASIC3.8□□□□□ -1.8
CDH3P22223 TAS2R15P-201ENST00000390674 928 ntBASIC3.8□□□□□ -1.8
CDH3P22223 RPS3AP9-201ENST00000417027 792 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC127526.1-201ENST00000417526 366 ntBASIC3.8□□□□□ -1.8
CDH3P22223 MTCO3P1-205ENST00000422088 832 ntBASIC3.8□□□□□ -1.8
CDH3P22223 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH3P22223 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH3P22223 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH3P22223 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH3P22223 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH3P22223 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 RPS26P56-201ENST00000444468 240 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH3P22223 BX276092.4-201ENST00000452056 248 ntBASIC3.8□□□□□ -1.8
CDH3P22223 RPL21P134-201ENST00000453468 483 ntBASIC3.8□□□□□ -1.8
CDH3P22223 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC087879.1-201ENST00000474343 374 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 AC016065.2-201ENST00000514530 444 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC023632.4-201ENST00000517783 191 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH3P22223 MED28P5-201ENST00000528254 438 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms