Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 OR5J1P-201ENST00000313544 939 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC011155.1-201ENST00000316512 456 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-853P-201ENST00000364306 107 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 RNU1-39P-201ENST00000383897 165 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 Y_RNA.384-201ENST00000383909 102 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-196P-201ENST00000384315 107 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 RPL31P52-201ENST00000407532 367 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AL358176.2-201ENST00000425769 204 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 Z82205.1-201ENST00000428456 297 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 Y_RNA.631-201ENST00000459607 101 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AL163540.1-201ENST00000485382 386 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC090096.1-201ENST00000489168 390 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 MRPS33P2-201ENST00000507850 322 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 GLUD1P3-202ENST00000508551 200 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-794P-201ENST00000517261 64 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AP003181.2-201ENST00000528941 181 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 SCOCP1-201ENST00000554676 349 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC083809.1-201ENST00000615051 472 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AC009229.4-201ENST00000623854 1947 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 AL034549.2-201ENST00000618285 3373 ntBASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CSB-PGBD3P0DP91 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 SSXP10-201ENST00000402595 565 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RPL5P18-201ENST00000406671 891 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RNA5SP113-201ENST00000410486 84 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-373P-201ENST00000411247 98 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 USP9YP16-201ENST00000430287 407 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 USP9YP23-201ENST00000455085 407 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC128716.1-201ENST00000475129 166 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC068587.1-201ENST00000483613 781 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC022133.1-201ENST00000490961 571 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RPSAP51-201ENST00000497462 645 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 GAPDHP56-201ENST00000506031 988 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC093677.1-201ENST00000514414 678 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 HMGN1P9-201ENST00000515212 298 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-1170P-201ENST00000515974 106 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 LINC00622-201ENST00000562811 1570 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AC016925.2-201ENST00000605108 242 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 MIR98-201ENST00000606724 119 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 SAMMSON-226ENST00000642089 1582 ntBASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.8□□□□□ -1.32
CSB-PGBD3P0DP91 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC091046.3-201ENST00000631455 1574 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms