Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.37□□□□□ -1.87
TPM1P09493 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.37□□□□□ -1.87
TPM1P09493 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 AP003385.6-201ENST00000531603 374 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 EIF5A2P1-201ENST00000564027 460 ntBASIC3.37□□□□□ -1.87
TPM1P09493 MIR3160-1-201ENST00000577972 85 ntBASIC3.37□□□□□ -1.87
TPM1P09493 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.37□□□□□ -1.87
TPM1P09493 AC009464.1-201ENST00000615731 469 ntBASIC3.37□□□□□ -1.87
TPM1P09493 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC018926.3-201ENST00000618841 406 ntBASIC3.37□□□□□ -1.87
TPM1P09493 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TPM1P09493 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TPM1P09493 AL645568.2-201ENST00000432815 1337 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC104446.1-201ENST00000613728 1321 ntBASIC3.37□□□□□ -1.87
TPM1P09493 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TPM1P09493 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TPM1P09493 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TPM1P09493 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
TPM1P09493 ZNF734P-201ENST00000419494 1534 ntBASIC3.36□□□□□ -1.87
TPM1P09493 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
TPM1P09493 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM1P09493 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM1P09493 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 RPL39P40-201ENST00000445481 146 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AC068135.1-201ENST00000446164 246 ntBASIC3.36□□□□□ -1.87
TPM1P09493 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.36□□□□□ -1.87
TPM1P09493 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
TPM1P09493 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.36□□□□□ -1.87
TPM1P09493 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TPM1P09493 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM1P09493 NOP56P3-201ENST00000549457 385 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.36□□□□□ -1.87
TPM1P09493 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM1P09493 AC006504.3-201ENST00000586818 523 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AL669831.4-202ENST00000590817 238 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AC023043.3-201ENST00000593113 385 ntBASIC3.36□□□□□ -1.87
TPM1P09493 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.36□□□□□ -1.87
TPM1P09493 MIR6748-201ENST00000610433 71 ntBASIC3.36□□□□□ -1.87
TPM1P09493 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM1P09493 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TPM1P09493 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TPM1P09493 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TPM1P09493 RNA5SP124-201ENST00000362739 110 ntBASIC3.35□□□□□ -1.87
TPM1P09493 Y_RNA.493-201ENST00000384422 102 ntBASIC3.35□□□□□ -1.87
TPM1P09493 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
TPM1P09493 HSFY1P1-201ENST00000423928 1178 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AC104332.2-201ENST00000429959 156 ntBASIC3.35□□□□□ -1.87
TPM1P09493 MTND2P21-201ENST00000436242 1042 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AL592437.1-201ENST00000443781 492 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM1P09493 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.35□□□□□ -1.87
TPM1P09493 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
TPM1P09493 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
TPM1P09493 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
TPM1P09493 RNA5SP76-201ENST00000516277 87 ntBASIC3.35□□□□□ -1.87
TPM1P09493 CIR1P1-201ENST00000524055 1133 ntBASIC3.35□□□□□ -1.87
TPM1P09493 AC239860.2-201ENST00000525886 270 ntBASIC3.35□□□□□ -1.87
TPM1P09493 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.35□□□□□ -1.87
TPM1P09493 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM1P09493 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM1P09493 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM1P09493 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
TPM1P09493 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.35□□□□□ -1.87
TPM1P09493 AC018755.4-201ENST00000619715 454 ntBASIC3.35□□□□□ -1.87
TPM1P09493 Z99129.2-201ENST00000619967 314 ntBASIC3.35□□□□□ -1.87
TPM1P09493 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.35□□□□□ -1.87
TPM1P09493 AC090897.3-201ENST00000636973 1157 ntBASIC3.35□□□□□ -1.87
TPM1P09493 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TPM1P09493 ZNF807-201ENST00000328088 1707 ntBASIC3.35□□□□□ -1.87
TPM1P09493 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
TPM1P09493 AC046144.1-201ENST00000478559 1853 ntBASIC3.35□□□□□ -1.87
TPM1P09493 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TPM1P09493 RN7SKP202-201ENST00000410439 330 ntBASIC3.34□□□□□ -1.87
TPM1P09493 RNU4-78P-201ENST00000410940 126 ntBASIC3.34□□□□□ -1.87
TPM1P09493 RPL7P10-201ENST00000417407 739 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM1P09493 MUPP-201ENST00000438111 566 ntBASIC3.34□□□□□ -1.87
TPM1P09493 H2AFZP6-201ENST00000444403 394 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AL445669.2-201ENST00000454425 421 ntBASIC3.34□□□□□ -1.87
TPM1P09493 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AC105914.1-201ENST00000511798 226 ntBASIC3.34□□□□□ -1.87
TPM1P09493 GMPSP1-201ENST00000514075 579 ntBASIC3.34□□□□□ -1.87
TPM1P09493 TRMT10BP1-201ENST00000519377 943 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms