Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC012498.1-201ENST00000424037 437 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 VN1R34P-201ENST00000447387 883 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 NF1P3-201ENST00000457709 450 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 RPL21P10-201ENST00000463521 490 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC146507.1-201ENST00000468335 354 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC092902.1-201ENST00000486999 259 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC078817.1-201ENST00000492623 435 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 IGKV2D-36-201ENST00000518643 226 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AP002906.1-201ENST00000603405 233 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC138649.5-201ENST00000637456 137 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AC010733.2-201ENST00000589496 5702 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 MTCO1P12-201ENST00000414273 1543 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 OR1L1-202ENST00000373686 1083 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 RNU6-1226P-201ENST00000384317 107 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 MIR449B-201ENST00000384995 97 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 SFR1P1-201ENST00000403720 688 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC092638.1-201ENST00000411966 1275 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC234064.1-201ENST00000436312 247 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 RPL7P59-201ENST00000447700 943 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 TVP23BP2-201ENST00000455082 615 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 CEACAMP4-201ENST00000457676 421 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC015908.1-201ENST00000478739 476 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 RPL21P129-201ENST00000491732 478 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 APOOP4-201ENST00000513530 597 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 RNU5A-7P-201ENST00000515979 116 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AP003355.1-201ENST00000518956 587 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC006518.2-201ENST00000542513 940 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 BPTFP1-201ENST00000579209 492 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 MIR4506-201ENST00000584693 77 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC006116.7-201ENST00000590141 756 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AL162713.1-201ENST00000604480 262 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC120053.1-201ENST00000607706 736 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPB1P04440 SAGE4P-201ENST00000442271 3381 ntBASIC2.88□□□□□ -1.95
HLA-DPB1P04440 MTCO1P24-201ENST00000515438 1558 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 SGO1P1-201ENST00000603525 1447 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 SNORA71.3-201ENST00000362582 128 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RNA5SP119-201ENST00000362715 117 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RNU6-619P-201ENST00000365146 108 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 OR6K3-202ENST00000368146 996 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RNU6-441P-201ENST00000384545 106 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 MIR16-1-201ENST00000385271 89 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 MCTS2P-201ENST00000394552 546 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RNA5SP229-201ENST00000410809 99 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RPS26P56-201ENST00000444468 240 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 HMGN1P5-201ENST00000448591 263 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RPL5P23-201ENST00000496040 868 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC109471.1-201ENST00000511631 612 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 NDUFB4P9-201ENST00000511646 388 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 RN7SKP43-201ENST00000516173 320 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms