Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.72□□□□□ -1.81
PDGFBP01127 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFBP01127 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFBP01127 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.72□□□□□ -1.81
PDGFBP01127 AL020997.3-201ENST00000602843 359 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 AL606834.2-201ENST00000602954 668 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 AC008638.3-201ENST00000603341 463 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 AL139395.1-201ENST00000603662 160 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 AL354976.1-201ENST00000613843 387 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFBP01127 AC098679.5-201ENST00000624394 571 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.72□□□□□ -1.81
PDGFBP01127 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFBP01127 BX649567.1-201ENST00000642071 1134 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PDGFBP01127 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFBP01127 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PDGFBP01127 AF127577.6-201ENST00000623352 2191 ntBASIC3.72□□□□□ -1.81
PDGFBP01127 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFBP01127 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.71□□□□□ -1.81
PDGFBP01127 AC000367.1-201ENST00000452711 1766 ntBASIC3.71□□□□□ -1.81
PDGFBP01127 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PDGFBP01127 RNA5SP52-201ENST00000362448 134 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 U3.19-201ENST00000390893 196 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL023807.1-201ENST00000407932 359 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 PPIAP17-201ENST00000438507 471 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 ARF4P4-201ENST00000439608 520 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 RPS17P13-201ENST00000448974 407 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 RPS4XP13-201ENST00000483219 789 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.71□□□□□ -1.82
PDGFBP01127 TPT1P8-201ENST00000510120 555 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 RNU6-415P-201ENST00000516252 97 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 RNA5SP135-201ENST00000517019 125 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 RANP9-201ENST00000519957 271 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFBP01127 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
PDGFBP01127 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFBP01127 MIR3690-201ENST00000580266 75 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL022067.1-201ENST00000602426 454 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL606834.3-201ENST00000602615 496 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC069431.2-201ENST00000604149 1099 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC025588.3-201ENST00000604182 274 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC073387.2-201ENST00000604797 784 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AC016597.2-201ENST00000613256 341 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL162274.2-201ENST00000614406 332 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL591424.2-201ENST00000617023 128 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFBP01127 AL031985.3-201ENST00000565390 2449 ntBASIC3.71□□□□□ -1.82
PDGFBP01127 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFBP01127 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFBP01127 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFBP01127 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PDGFBP01127 OR1L1-202ENST00000373686 1083 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 MIR93-201ENST00000385024 80 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 SNORD17-201ENST00000390930 237 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 RPL5P18-201ENST00000406671 891 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AL139098.1-201ENST00000407291 389 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 AL133384.1-201ENST00000412744 351 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC093698.1-201ENST00000423843 571 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFBP01127 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFBP01127 VDAC1P3-201ENST00000434069 851 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 NDUFA5P7-201ENST00000452914 242 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 AP001992.1-205ENST00000462248 379 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 S100A11P2-201ENST00000467589 312 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms