Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 COX6CP15-201ENST00000426313 211 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 RPS3AP54-201ENST00000435535 734 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 MTND6P6-201ENST00000478031 263 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC012158.1-204ENST00000483430 465 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AL358832.1-201ENST00000497800 389 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC093840.1-201ENST00000511599 336 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 RN7SKP276-201ENST00000516242 268 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 RNU6-506P-201ENST00000516553 94 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 MTND4LP18-201ENST00000526864 291 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS4BO75351 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC084757.1-201ENST00000559987 490 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4BO75351 RN7SL802P-201ENST00000577858 299 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AC009977.1-201ENST00000586015 570 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 SLC25A36P1-201ENST00000590111 465 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS4BO75351 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4BO75351 AC233280.2-201ENST00000603917 1070 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4BO75351 AL596275.2-204ENST00000641628 552 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 AL596275.2-206ENST00000641957 626 ntBASIC4.56□□□□□ -1.68
VPS4BO75351 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS4BO75351 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4BO75351 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
VPS4BO75351 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS4BO75351 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS4BO75351 OR4K15-201ENST00000305051 1216 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 RNA5SP191-201ENST00000362585 102 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 RAD23BP1-201ENST00000421404 1227 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 ISCA1P1-201ENST00000426679 387 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 RPL12P46-201ENST00000436610 195 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 RBMX2P4-201ENST00000441256 376 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 RPL7P36-201ENST00000444633 681 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 AC003071.1-201ENST00000451219 789 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC112204.1-201ENST00000502591 103 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC093824.1-201ENST00000508796 343 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC034159.1-201ENST00000513885 583 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 MTCO2P4-201ENST00000517968 247 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC133555.2-201ENST00000550213 292 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC087883.1-201ENST00000551882 391 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC090312.1-201ENST00000580637 348 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 AL353997.4-201ENST00000586196 166 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC022726.1-201ENST00000587475 207 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC022916.3-201ENST00000592961 742 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS4BO75351 AC098614.4-201ENST00000607601 462 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC103710.1-201ENST00000610003 901 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 MLECP1-201ENST00000615893 709 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 AC068724.3-201ENST00000625906 87 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 CYP3A51P-201ENST00000633513 256 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 OR5AK4P-201ENST00000635912 903 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS4BO75351 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS4BO75351 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS4BO75351 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 OR51H2P-202ENST00000641424 3046 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS4BO75351 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS4BO75351 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.55□□□□□ -1.68
VPS4BO75351 ASNSP1-201ENST00000518311 1939 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VPS4BO75351 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VPS4BO75351 AL031679.1-201ENST00000400616 525 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms