Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 AL355375.2-201ENST00000574825 175 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC007687.1-201ENST00000602704 304 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC023813.4-201ENST00000607580 580 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AL355472.4-201ENST00000610233 626 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 CYP3A51P-201ENST00000633513 256 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PTCD1O75127 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PTCD1O75127 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCD1O75127 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCD1O75127 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCD1O75127 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCD1O75127 Y_RNA.166-201ENST00000363730 102 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 MIR298-201ENST00000401212 88 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL122016.1-201ENST00000403365 367 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL162578.1-201ENST00000406202 378 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCD1O75127 UQCRBP1-201ENST00000421129 336 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL592293.2-201ENST00000422292 996 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL353678.1-201ENST00000422735 741 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC009238.2-201ENST00000431026 355 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL359265.2-201ENST00000434367 631 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC005154.2-201ENST00000438110 379 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 RPS15AP9-201ENST00000439856 381 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL049734.2-201ENST00000441066 616 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC104651.2-201ENST00000447549 528 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC087879.1-201ENST00000474343 374 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC026979.1-201ENST00000492525 396 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC093677.1-201ENST00000514414 678 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC105029.1-201ENST00000520250 669 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCD1O75127 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCD1O75127 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC011611.1-201ENST00000552179 197 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCD1O75127 HMGB1P6-201ENST00000569046 646 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCD1O75127 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 MIR5096-201ENST00000583713 70 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL512605.2-201ENST00000592972 256 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 VN1R107P-201ENST00000601784 209 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AC006006.1-201ENST00000603082 144 ntBASIC6.4□□□□□ -1.38
PTCD1O75127 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCD1O75127 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PTCD1O75127 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
PTCD1O75127 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTCD1O75127 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTCD1O75127 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTCD1O75127 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.4□□□□□ -1.39
PTCD1O75127 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
PTCD1O75127 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
PTCD1O75127 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PTCD1O75127 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTCD1O75127 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
PTCD1O75127 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTCD1O75127 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCD1O75127 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 RN7SKP106-201ENST00000410832 272 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCD1O75127 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCD1O75127 RPL31P45-201ENST00000419532 356 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RPL18P10-201ENST00000425606 538 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCD1O75127 NRBF2P3-201ENST00000432731 865 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 MED28P3-201ENST00000444288 531 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 MRPL50P4-201ENST00000446432 475 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AC091180.1-201ENST00000462104 372 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RPS27AP17-201ENST00000463344 455 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 PLGLA-201ENST00000465668 449 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 PCBP2P3-201ENST00000509726 843 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RN7SKP13-201ENST00000515933 244 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RNU6-264P-201ENST00000517134 104 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RN7SKP92-201ENST00000517266 244 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCD1O75127 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTCD1O75127 AP003497.1-201ENST00000528472 562 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms