Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC109454.4-201ENST00000623411 649 ntBASIC3.52□□□□□ -1.85
SDC3O75056 AC098679.5-201ENST00000624394 571 ntBASIC3.52□□□□□ -1.85
SDC3O75056 AC004808.1-201ENST00000627671 721 ntBASIC3.52□□□□□ -1.85
SDC3O75056 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.52□□□□□ -1.85
SDC3O75056 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SDC3O75056 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SDC3O75056 DBF4P1-201ENST00000412976 1892 ntBASIC3.52□□□□□ -1.85
SDC3O75056 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SDC3O75056 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDC3O75056 ANKRD36P1-201ENST00000344424 659 ntBASIC3.51□□□□□ -1.85
SDC3O75056 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
SDC3O75056 SNORA51.2-201ENST00000364595 132 ntBASIC3.51□□□□□ -1.85
SDC3O75056 RNU6-298P-201ENST00000390888 96 ntBASIC3.51□□□□□ -1.85
SDC3O75056 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
SDC3O75056 HSPE1P26-201ENST00000405341 275 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
SDC3O75056 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 OFD1P18Y-201ENST00000420889 959 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 FCF1P6-201ENST00000456841 595 ntBASIC3.51□□□□□ -1.85
SDC3O75056 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 RPL31P13-201ENST00000484151 370 ntBASIC3.51□□□□□ -1.85
SDC3O75056 RPL23AP55-201ENST00000498163 452 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC048346.1-201ENST00000510247 144 ntBASIC3.51□□□□□ -1.85
SDC3O75056 SCARNA13-201ENST00000516672 275 ntBASIC3.51□□□□□ -1.85
SDC3O75056 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 NDUFS5P6-201ENST00000529136 295 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC118942.1-201ENST00000529674 1035 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.51□□□□□ -1.85
SDC3O75056 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.51□□□□□ -1.85
SDC3O75056 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SDC3O75056 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 AC090330.1-201ENST00000588646 764 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 AL606834.3-201ENST00000602615 496 ntBASIC3.51□□□□□ -1.85
SDC3O75056 MRPS35P3-201ENST00000603189 709 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 MIR7851-201ENST00000610611 160 ntBASIC3.51□□□□□ -1.85
SDC3O75056 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC3O75056 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 AP003485.1-201ENST00000625093 753 ntBASIC3.51□□□□□ -1.85
SDC3O75056 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 AL133383.2-201ENST00000622958 2336 ntBASIC3.51□□□□□ -1.85
SDC3O75056 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC3O75056 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC3O75056 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDC3O75056 USP8P1-201ENST00000494673 3183 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AF127577.6-201ENST00000623352 2191 ntBASIC3.51□□□□□ -1.85
SDC3O75056 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC3O75056 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SDC3O75056 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.5□□□□□ -1.85
SDC3O75056 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SDC3O75056 RNU6-921P-201ENST00000384361 107 ntBASIC3.5□□□□□ -1.85
SDC3O75056 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 MTCO1P56-201ENST00000401674 224 ntBASIC3.5□□□□□ -1.85
SDC3O75056 HLFP1-201ENST00000402375 499 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC3O75056 RPL30P2-201ENST00000414021 291 ntBASIC3.5□□□□□ -1.85
SDC3O75056 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 HSFY7P-201ENST00000432672 318 ntBASIC3.5□□□□□ -1.85
SDC3O75056 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC3O75056 NDUFB1P1-201ENST00000435191 180 ntBASIC3.5□□□□□ -1.85
SDC3O75056 HSFY8P-201ENST00000437934 318 ntBASIC3.5□□□□□ -1.85
SDC3O75056 NDUFA5P7-201ENST00000452914 242 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC098824.1-201ENST00000453565 980 ntBASIC3.5□□□□□ -1.85
SDC3O75056 HSFY5P-201ENST00000453726 309 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 MTCO3P20-201ENST00000454926 688 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 RPL6P9-201ENST00000466502 859 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC3O75056 AP004371.1-201ENST00000525240 214 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC3O75056 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 LSM6P2-201ENST00000552208 177 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms