Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 UBE2V1P9-201ENST00000414760 368 ntBASIC3.3□□□□□ -1.88
HCN1O60741 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC245054.1-201ENST00000420944 258 ntBASIC3.3□□□□□ -1.88
HCN1O60741 SFR1P2-201ENST00000421841 730 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN1O60741 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 RPL7P52-201ENST00000449200 742 ntBASIC3.3□□□□□ -1.88
HCN1O60741 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
HCN1O60741 RPL23AP44-201ENST00000482216 473 ntBASIC3.3□□□□□ -1.88
HCN1O60741 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 TXNP6-201ENST00000510190 310 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC109471.1-201ENST00000511631 612 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
HCN1O60741 RNU6-1073P-201ENST00000517182 106 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC087894.1-201ENST00000538359 518 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.3□□□□□ -1.88
HCN1O60741 DNAJC19P3-201ENST00000594491 331 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
HCN1O60741 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
HCN1O60741 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC007566.2-201ENST00000603642 413 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC002487.1-201ENST00000604565 994 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AL009028.1-201ENST00000604895 802 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 AC069200.1-201ENST00000609511 323 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC069209.1-201ENST00000619282 651 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC012314.7-201ENST00000619693 93 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
HCN1O60741 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HCN1O60741 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN1O60741 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HCN1O60741 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HCN1O60741 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
HCN1O60741 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
HCN1O60741 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
HCN1O60741 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
HCN1O60741 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 GSTA8P-201ENST00000404253 637 ntBASIC3.29□□□□□ -1.88
HCN1O60741 SNORA11.1-201ENST00000408133 129 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN1O60741 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 RPS26P56-201ENST00000444468 240 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
HCN1O60741 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
HCN1O60741 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.29□□□□□ -1.88
HCN1O60741 MTCO2P32-201ENST00000514865 403 ntBASIC3.29□□□□□ -1.88
HCN1O60741 RNU2-27P-201ENST00000516185 142 ntBASIC3.29□□□□□ -1.88
HCN1O60741 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 OR5B10P-201ENST00000532869 642 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AC023161.2-201ENST00000551218 780 ntBASIC3.29□□□□□ -1.88
HCN1O60741 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
HCN1O60741 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN1O60741 AC006116.10-201ENST00000591836 581 ntBASIC3.29□□□□□ -1.88
HCN1O60741 RPAP2P1-201ENST00000603626 1168 ntBASIC3.29□□□□□ -1.88
HCN1O60741 VN1R74P-201ENST00000613259 503 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AL512427.1-201ENST00000618593 349 ntBASIC3.29□□□□□ -1.88
HCN1O60741 VN1R7P-201ENST00000619242 903 ntBASIC3.29□□□□□ -1.88
HCN1O60741 AC007275.1-201ENST00000621243 671 ntBASIC3.29□□□□□ -1.88
HCN1O60741 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN1O60741 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
HCN1O60741 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.28□□□□□ -1.88
HCN1O60741 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RNU6-1181P-201ENST00000384191 106 ntBASIC3.28□□□□□ -1.88
HCN1O60741 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
HCN1O60741 SKINT1L-201ENST00000401057 817 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms