Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 GDI2P1-201ENST00000429312 1336 ntBASIC3.63□□□□□ -1.83
SNX3O60493 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 MTND5P24-201ENST00000438892 1767 ntBASIC3.63□□□□□ -1.83
SNX3O60493 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SNX3O60493 AC005539.1-201ENST00000443768 1479 ntBASIC3.62□□□□□ -1.83
SNX3O60493 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX3O60493 RNU6-1214P-201ENST00000363650 109 ntBASIC3.62□□□□□ -1.83
SNX3O60493 RNU6-761P-201ENST00000384148 107 ntBASIC3.62□□□□□ -1.83
SNX3O60493 RPL23AP29-201ENST00000397284 453 ntBASIC3.62□□□□□ -1.83
SNX3O60493 MTND4P13-201ENST00000402078 1023 ntBASIC3.62□□□□□ -1.83
SNX3O60493 RN7SKP177-201ENST00000410567 355 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC011933.1-201ENST00000413334 321 ntBASIC3.62□□□□□ -1.83
SNX3O60493 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.62□□□□□ -1.83
SNX3O60493 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 Z97055.1-201ENST00000419730 712 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC010099.3-201ENST00000423896 409 ntBASIC3.62□□□□□ -1.83
SNX3O60493 NIPA2P1-201ENST00000426223 976 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AL732292.1-201ENST00000426692 226 ntBASIC3.62□□□□□ -1.83
SNX3O60493 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX3O60493 RPS25P9-201ENST00000435591 252 ntBASIC3.62□□□□□ -1.83
SNX3O60493 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 USP9YP7-201ENST00000436723 430 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX3O60493 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX3O60493 AC073264.2-201ENST00000448886 166 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 USP9YP32-201ENST00000452432 430 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX3O60493 AC116533.1-201ENST00000459748 321 ntBASIC3.62□□□□□ -1.83
SNX3O60493 RPL7P47-201ENST00000497299 556 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC021146.5-201ENST00000503544 545 ntBASIC3.62□□□□□ -1.83
SNX3O60493 TMEM251P1-201ENST00000503717 318 ntBASIC3.62□□□□□ -1.83
SNX3O60493 XKRY-201ENST00000510392 1100 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC026412.2-201ENST00000512270 1075 ntBASIC3.62□□□□□ -1.83
SNX3O60493 Vault.1-201ENST00000516474 102 ntBASIC3.62□□□□□ -1.83
SNX3O60493 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
SNX3O60493 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 OR5AK1P-201ENST00000524837 922 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 AC008011.1-201ENST00000545989 227 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AL121766.1-201ENST00000547436 487 ntBASIC3.62□□□□□ -1.83
SNX3O60493 PSMB7P1-201ENST00000556349 514 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX3O60493 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX3O60493 AL354943.1-201ENST00000572103 781 ntBASIC3.62□□□□□ -1.83
SNX3O60493 MIR4480-201ENST00000582492 71 ntBASIC3.62□□□□□ -1.83
SNX3O60493 MAGOH2P-202ENST00000584384 429 ntBASIC3.62□□□□□ -1.83
SNX3O60493 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX3O60493 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX3O60493 AL669831.4-202ENST00000590817 238 ntBASIC3.62□□□□□ -1.83
SNX3O60493 BNIP3P24-201ENST00000593398 557 ntBASIC3.62□□□□□ -1.83
SNX3O60493 VN1R79P-201ENST00000593540 513 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AC103881.1-201ENST00000603476 538 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AL021707.7-201ENST00000607991 416 ntBASIC3.62□□□□□ -1.83
SNX3O60493 U73479.1-201ENST00000618062 168 ntBASIC3.62□□□□□ -1.83
SNX3O60493 AP002791.1-201ENST00000623291 381 ntBASIC3.62□□□□□ -1.83
SNX3O60493 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX3O60493 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX3O60493 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SNX3O60493 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 AP002907.1-201ENST00000606361 1430 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AL390862.1-201ENST00000635467 1469 ntBASIC3.61□□□□□ -1.83
SNX3O60493 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNX3O60493 SNORA73.2-201ENST00000364946 201 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AL133270.1-201ENST00000402635 279 ntBASIC3.61□□□□□ -1.83
SNX3O60493 MIR1284-201ENST00000408337 120 ntBASIC3.61□□□□□ -1.83
SNX3O60493 RNU4-78P-201ENST00000410940 126 ntBASIC3.61□□□□□ -1.83
SNX3O60493 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX3O60493 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX3O60493 RPL26P28-201ENST00000451325 435 ntBASIC3.61□□□□□ -1.83
SNX3O60493 USP9YP34-201ENST00000453983 808 ntBASIC3.61□□□□□ -1.83
SNX3O60493 ANKRD26P4-201ENST00000455755 950 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC026410.2-201ENST00000460281 156 ntBASIC3.61□□□□□ -1.83
SNX3O60493 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
SNX3O60493 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX3O60493 S100A11P1-201ENST00000477525 312 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AP000926.1-201ENST00000479573 241 ntBASIC3.61□□□□□ -1.83
SNX3O60493 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX3O60493 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX3O60493 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.61□□□□□ -1.83
SNX3O60493 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.61□□□□□ -1.83
SNX3O60493 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 TOMM20P2-201ENST00000540082 421 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX3O60493 AC006270.3-201ENST00000605967 1036 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX3O60493 AC245297.2-201ENST00000610119 565 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms