Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.72□□□□□ -1.33
ACTN4O43707 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.72□□□□□ -1.33
ACTN4O43707 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ACTN4O43707 MRPS21P8-201ENST00000569196 235 ntBASIC6.72□□□□□ -1.33
ACTN4O43707 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.72□□□□□ -1.33
ACTN4O43707 AC103710.2-202ENST00000641454 2853 ntBASIC6.72□□□□□ -1.33
ACTN4O43707 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.72□□□□□ -1.33
ACTN4O43707 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.72□□□□□ -1.33
ACTN4O43707 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ACTN4O43707 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ACTN4O43707 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.71□□□□□ -1.33
ACTN4O43707 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
ACTN4O43707 RBMY1HP-201ENST00000382759 1389 ntBASIC6.71□□□□□ -1.33
ACTN4O43707 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ACTN4O43707 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.71□□□□□ -1.33
ACTN4O43707 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
ACTN4O43707 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ACTN4O43707 AL359955.1-201ENST00000455242 3275 ntBASIC6.71□□□□□ -1.33
ACTN4O43707 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
ACTN4O43707 RNU4-42P-201ENST00000364738 142 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 Y_RNA.399-201ENST00000383955 105 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 RPL12P12-201ENST00000424633 501 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AL353597.2-202ENST00000434901 373 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 GAPDHP59-201ENST00000435908 267 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 RHOT1P3-201ENST00000436571 331 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 RPS12P17-201ENST00000438591 377 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AL356121.1-201ENST00000442911 156 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 FCF1P4-201ENST00000448326 183 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 NDUFB1P2-201ENST00000449477 176 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC104164.1-201ENST00000460282 590 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC117503.1-201ENST00000472241 394 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 RPL23AP55-201ENST00000498163 452 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC093853.1-201ENST00000515689 483 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 RNU6-897P-201ENST00000517135 105 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC010620.2-201ENST00000600135 313 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC012443.1-201ENST00000605605 231 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 AC009570.1-201ENST00000609599 745 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 uc_338.29-201ENST00000615099 168 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC073488.6-201ENST00000632293 754 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ACTN4O43707 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
ACTN4O43707 AC108751.5-201ENST00000492880 1336 ntBASIC6.71□□□□□ -1.34
ACTN4O43707 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ACTN4O43707 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.71□□□□□ -1.34
ACTN4O43707 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ACTN4O43707 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.7□□□□□ -1.34
ACTN4O43707 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
ACTN4O43707 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.7□□□□□ -1.34
ACTN4O43707 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 AC027575.3-201ENST00000583058 2747 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 RNU4-50P-201ENST00000364361 141 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 SNORA51.11-201ENST00000384442 131 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 SNORA16.2-201ENST00000390991 127 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.7□□□□□ -1.34
ACTN4O43707 RPL7P2-201ENST00000427639 268 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 RPL21P112-201ENST00000434403 463 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 SETP20-201ENST00000457046 852 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.7□□□□□ -1.34
ACTN4O43707 FTH1P2-201ENST00000466086 412 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 RPL17P19-201ENST00000489069 552 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 RNU6-798P-201ENST00000516912 103 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.7□□□□□ -1.34
ACTN4O43707 AP002770.2-201ENST00000543613 532 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.7□□□□□ -1.34
ACTN4O43707 AC006600.1-201ENST00000572529 153 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 AC012669.1-201ENST00000603209 283 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 AC010900.2-201ENST00000604508 210 ntBASIC6.7□□□□□ -1.34
ACTN4O43707 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
ACTN4O43707 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ACTN4O43707 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.7□□□□□ -1.34
ACTN4O43707 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ACTN4O43707 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.7□□□□□ -1.34
ACTN4O43707 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
ACTN4O43707 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ACTN4O43707 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms