Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
MSI1O43347 RNU4-89P-201ENST00000607443 133 ntBASIC4.27□□□□□ -1.73
MSI1O43347 AC112484.5-201ENST00000624189 228 ntBASIC4.27□□□□□ -1.73
MSI1O43347 AC231657.1-201ENST00000624313 397 ntBASIC4.27□□□□□ -1.73
MSI1O43347 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.27□□□□□ -1.73
MSI1O43347 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MSI1O43347 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MSI1O43347 NOL8P1-201ENST00000508336 3529 ntBASIC4.27□□□□□ -1.73
MSI1O43347 OR4G11P-202ENST00000642116 1414 ntBASIC4.27□□□□□ -1.73
MSI1O43347 AC107027.3-201ENST00000565095 3473 ntBASIC4.27□□□□□ -1.73
MSI1O43347 ERCC6-202ENST00000374127 1782 ntBASIC4.27□□□□□ -1.73
MSI1O43347 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MSI1O43347 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MSI1O43347 MTND4P5-201ENST00000435821 1374 ntBASIC4.27□□□□□ -1.73
MSI1O43347 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.27□□□□□ -1.73
MSI1O43347 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.26□□□□□ -1.73
MSI1O43347 CR383658.2-201ENST00000547576 1525 ntBASIC4.26□□□□□ -1.73
MSI1O43347 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 AC105074.1-201ENST00000623380 3095 ntBASIC4.26□□□□□ -1.73
MSI1O43347 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 AL356489.2-201ENST00000566968 3528 ntBASIC4.26□□□□□ -1.73
MSI1O43347 RNA5SP283-201ENST00000365604 119 ntBASIC4.26□□□□□ -1.73
MSI1O43347 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
MSI1O43347 Y_RNA.559-201ENST00000384686 107 ntBASIC4.26□□□□□ -1.73
MSI1O43347 MIR649-201ENST00000384843 97 ntBASIC4.26□□□□□ -1.73
MSI1O43347 RNU4-6P-201ENST00000410804 122 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC004022.2-201ENST00000413824 193 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.26□□□□□ -1.73
MSI1O43347 OR5BE1P-201ENST00000425977 939 ntBASIC4.26□□□□□ -1.73
MSI1O43347 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 AL117339.2-201ENST00000430475 180 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 AL162151.2-201ENST00000448875 158 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 MTCO3P2-201ENST00000457365 171 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC097493.1-201ENST00000463958 372 ntBASIC4.26□□□□□ -1.73
MSI1O43347 RPS4XP15-201ENST00000489210 795 ntBASIC4.26□□□□□ -1.73
MSI1O43347 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.26□□□□□ -1.73
MSI1O43347 MIR2116-201ENST00000517221 80 ntBASIC4.26□□□□□ -1.73
MSI1O43347 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.26□□□□□ -1.73
MSI1O43347 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.26□□□□□ -1.73
MSI1O43347 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.26□□□□□ -1.73
MSI1O43347 AGGF1P4-201ENST00000568249 801 ntBASIC4.26□□□□□ -1.73
MSI1O43347 LARP7P2-201ENST00000575306 125 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.26□□□□□ -1.73
MSI1O43347 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 AL451044.1-201ENST00000604867 238 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC239868.4-201ENST00000608318 671 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AL031666.3-201ENST00000609320 1006 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 AL356596.1-201ENST00000624230 379 ntBASIC4.26□□□□□ -1.73
MSI1O43347 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 OR5BE1P-202ENST00000641168 1176 ntBASIC4.26□□□□□ -1.73
MSI1O43347 AL079343.1-201ENST00000572358 1771 ntBASIC4.26□□□□□ -1.73
MSI1O43347 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.26□□□□□ -1.73
MSI1O43347 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSI1O43347 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.26□□□□□ -1.73
MSI1O43347 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 PABPC1P9-201ENST00000426076 1612 ntBASIC4.25□□□□□ -1.73
MSI1O43347 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.25□□□□□ -1.73
MSI1O43347 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.25□□□□□ -1.73
MSI1O43347 RNU6-723P-201ENST00000383973 107 ntBASIC4.25□□□□□ -1.73
MSI1O43347 RNU2-21P-201ENST00000410368 188 ntBASIC4.25□□□□□ -1.73
MSI1O43347 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.25□□□□□ -1.73
MSI1O43347 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.25□□□□□ -1.73
MSI1O43347 AL031779.1-201ENST00000415663 330 ntBASIC4.25□□□□□ -1.73
MSI1O43347 RPS3AP9-201ENST00000417027 792 ntBASIC4.25□□□□□ -1.73
MSI1O43347 MTCO2P34-201ENST00000421994 607 ntBASIC4.25□□□□□ -1.73
MSI1O43347 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 ZYG11AP1-201ENST00000430329 837 ntBASIC4.25□□□□□ -1.73
MSI1O43347 AL358472.1-201ENST00000431295 329 ntBASIC4.25□□□□□ -1.73
MSI1O43347 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
MSI1O43347 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.25□□□□□ -1.73
MSI1O43347 HLA-N-201ENST00000437516 135 ntBASIC4.25□□□□□ -1.73
MSI1O43347 AL512286.1-201ENST00000439244 400 ntBASIC4.25□□□□□ -1.73
MSI1O43347 RPS26P56-201ENST00000444468 240 ntBASIC4.25□□□□□ -1.73
MSI1O43347 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.25□□□□□ -1.73
MSI1O43347 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.25□□□□□ -1.73
MSI1O43347 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSI1O43347 RPL36AP13-201ENST00000457490 317 ntBASIC4.25□□□□□ -1.73
MSI1O43347 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms