Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP003122.6-201ENST00000623831 495 ntBASIC5.51□□□□□ -1.53
SRGAP3O43295 AC116563.2-201ENST00000624751 535 ntBASIC5.51□□□□□ -1.53
SRGAP3O43295 MIR3662-201ENST00000637030 95 ntBASIC5.51□□□□□ -1.53
SRGAP3O43295 AP001273.1-201ENST00000624493 3152 ntBASIC5.51□□□□□ -1.53
SRGAP3O43295 MAPK10-286ENST00000641208 8747 ntBASIC5.51□□□□□ -1.53
SRGAP3O43295 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRGAP3O43295 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SRGAP3O43295 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRGAP3O43295 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.5□□□□□ -1.53
SRGAP3O43295 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 RNF6P1-201ENST00000444889 1784 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 OR5P1P-201ENST00000299512 925 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 OR4A15-201ENST00000314706 1035 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SRGAP3O43295 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SRGAP3O43295 MIR3065-201ENST00000390137 79 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AL450338.1-201ENST00000407987 512 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 RN7SKP167-201ENST00000411047 285 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 FCF1P2-201ENST00000415284 583 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 USP9YP20-201ENST00000419224 558 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AL592293.2-201ENST00000422292 996 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 FHP1-201ENST00000442741 703 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 GAPDHP17-201ENST00000449858 1001 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.5□□□□□ -1.53
SRGAP3O43295 NDUFA5P7-201ENST00000452914 242 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 NF1P3-201ENST00000457709 450 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 PMCHL2-203ENST00000457791 237 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 MEMO1P3-201ENST00000459811 302 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC011276.1-201ENST00000469688 323 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC017015.1-201ENST00000477387 286 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 RN7SL481P-201ENST00000477764 299 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 RPS26P24-201ENST00000497656 331 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 KCTD9P2-201ENST00000512203 1013 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 Y_RNA.675-201ENST00000516389 149 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.5□□□□□ -1.53
SRGAP3O43295 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.5□□□□□ -1.53
SRGAP3O43295 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AC079587.1-201ENST00000603846 277 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 RNU6-84P-201ENST00000607737 102 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC104010.1-201ENST00000616889 150 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 ATE1-AS1-202ENST00000636460 506 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AC112487.2-201ENST00000637950 304 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.5□□□□□ -1.53
SRGAP3O43295 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.5□□□□□ -1.53
SRGAP3O43295 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SRGAP3O43295 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.5□□□□□ -1.53
SRGAP3O43295 AC090017.1-201ENST00000548612 1779 ntBASIC5.5□□□□□ -1.53
SRGAP3O43295 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 EOGT-210ENST00000615922 1931 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 MIR331-201ENST00000362302 94 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 RNU4-73P-201ENST00000363164 141 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 RNU6-216P-201ENST00000363282 104 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.49□□□□□ -1.53
SRGAP3O43295 RPS20P15-201ENST00000412792 311 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 USP9YP36-201ENST00000424581 829 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC016712.1-201ENST00000431088 378 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 RPL38P1-201ENST00000460914 211 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 RN7SL98P-201ENST00000462271 300 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 RN7SL810P-201ENST00000493031 276 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC010493.1-201ENST00000513479 292 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 RNU6-150P-201ENST00000516237 95 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC027309.2-201ENST00000520566 192 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 ARL2BPP5-201ENST00000523141 481 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 OR5AP1P-201ENST00000529730 940 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 HIGD1AP5-201ENST00000529959 259 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 CYCSP28-201ENST00000534284 321 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 AL512360.1-201ENST00000555346 234 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 223.3 ms