Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-301P-201ENST00000384277 107 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORD65-201ENST00000391079 73 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL513475.1-201ENST00000406602 315 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL360081.1-201ENST00000428299 555 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 USP9YP9-201ENST00000429406 715 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL513321.1-201ENST00000441175 761 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC233279.1-201ENST00000455300 423 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090515.1-201ENST00000465295 476 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RN7SL132P-201ENST00000478131 296 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS15AP34-201ENST00000487776 387 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC002456.2-201ENST00000509356 380 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RN7SKP18-201ENST00000516005 275 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RN7SKP141-201ENST00000516167 338 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-352P-201ENST00000516908 107 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC005476.1-201ENST00000554427 397 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092868.3-201ENST00000560515 784 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC007336.1-201ENST00000576365 3828 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090525.3-201ENST00000605601 189 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC015849.2-201ENST00000605738 409 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU1-30P-201ENST00000606575 163 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 VN1R74P-201ENST00000613259 503 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR6826-201ENST00000617808 98 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR6861-201ENST00000618657 64 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 AC127502.3-201ENST00000636170 1206 ntBASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC1.51□□□□□ -2.17
CHKB-CPT1BH3BT56 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC022031.1-201ENST00000585985 2593 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL21P132-201ENST00000331267 462 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR26A1-201ENST00000362205 77 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA1.3-201ENST00000384676 136 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-244P-201ENST00000391028 104 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ST13P16-201ENST00000401760 781 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR1250-201ENST00000408098 113 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RNA5SP317-201ENST00000410176 116 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RNA5SP311-201ENST00000411290 116 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP5A1P2-201ENST00000412323 255 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 BX842559.1-201ENST00000419615 532 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 KRTAP8-2P-201ENST00000440620 186 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP5C1P1-201ENST00000441945 895 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AL513328.1-201ENST00000446460 224 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 DPPA3P1-201ENST00000448050 469 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ELOCP23-201ENST00000452014 332 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC108734.3-201ENST00000481241 1165 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 FAM172BP-201ENST00000487497 1089 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 MTCO3P44-201ENST00000510977 541 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RNA5SP315-201ENST00000516340 116 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 RNA5SP312-201ENST00000517068 116 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 MRPL49P2-201ENST00000521066 465 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC087241.2-201ENST00000535801 324 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC107954.1-201ENST00000565906 727 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ZNF415P1-201ENST00000582279 1166 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 OR1M4P-201ENST00000589199 287 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms