Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 ASNSP3-201ENST00000451989 1306 ntBASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 AC004972.1-201ENST00000623934 2209 ntBASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 FAM91A3P-201ENST00000456826 2544 ntBASIC6.17□□□□□ -1.42
TMEM88BA6NKF7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC005224.3-201ENST00000584683 2140 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RNU4-79P-201ENST00000362764 141 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RNU6-179P-201ENST00000363350 107 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RNU6-511P-201ENST00000363496 107 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AL606923.1-201ENST00000406616 190 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 IFNA20P-201ENST00000436840 528 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 PPIAP3-201ENST00000450588 505 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 HMGB3P21-201ENST00000452483 547 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC005008.1-201ENST00000456151 612 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC079804.1-201ENST00000461922 436 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 MRPS17P3-201ENST00000465453 385 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RPL23AP11-201ENST00000475260 469 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 RN7SKP234-201ENST00000517173 224 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AP001029.3-201ENST00000588063 596 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC006254.3-201ENST00000603353 884 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AL442067.2-201ENST00000614033 363 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC090617.10-201ENST00000624308 134 ntBASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TMEM88BA6NKF7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC067945.1-201ENST00000342609 618 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 Y_RNA.22-201ENST00000362492 102 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 RNA5SP191-201ENST00000362585 102 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 SNORA62.1-201ENST00000364287 154 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 RNU11-4P-201ENST00000391149 133 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AL109755.1-201ENST00000401791 649 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 RN7SKP100-201ENST00000411258 284 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC096921.1-201ENST00000411661 375 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC116036.1-201ENST00000412199 367 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 RPL34P6-201ENST00000432390 345 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 NPM1P18-201ENST00000434232 732 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 MTND3P16-201ENST00000452205 344 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC068522.1-201ENST00000482895 345 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC026427.2-201ENST00000506228 536 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 RNU6-1314P-201ENST00000517139 104 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC090948.1-201ENST00000607464 549 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AL122125.1-201ENST00000616999 600 ntBASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEM88BA6NKF7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 AC114774.1-201ENST00000507410 1770 ntBASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 AC139713.2-214ENST00000642059 1811 ntBASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms