Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RNU6-1249P-201ENST00000363237 111 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 Y_RNA.126-201ENST00000363382 111 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RNA5SP515-201ENST00000364570 118 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 MIR554-201ENST00000384874 96 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RNU6-821P-201ENST00000390995 107 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC025750.1-201ENST00000399891 379 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 ATF1P1-201ENST00000406040 927 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RN7SKP156-201ENST00000410308 342 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC109780.2-201ENST00000413467 845 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 GOT2P5-201ENST00000433995 546 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 KCTD10P1-201ENST00000434203 625 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 YWHAZP7-201ENST00000436906 631 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RPS29P7-201ENST00000439662 171 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RPL17P49-201ENST00000443728 411 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 MTND2P3-201ENST00000452458 470 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC017015.1-201ENST00000477387 286 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 VN1R105P-201ENST00000486595 910 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RN7SL323P-201ENST00000494712 295 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 FTH1P21-201ENST00000512179 511 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RN7SKP43-201ENST00000516173 320 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC124293.1-201ENST00000530034 493 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 CYCSP30-201ENST00000546447 172 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC067852.3-201ENST00000589177 561 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 RNU1-30P-201ENST00000606575 163 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC112503.2-201ENST00000609005 552 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC005344.1-201ENST00000613391 459 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AL360181.4-201ENST00000621752 134 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 ZNF807-201ENST00000328088 1707 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 AC008432.1-201ENST00000615912 1320 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 FAM35CP-201ENST00000554755 2470 ntBASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.61□□□□□ -1.99
RBFOX3A6NFN3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 RPL7P60-201ENST00000397636 735 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 MTND4LP20-201ENST00000402379 270 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AL354719.1-201ENST00000406535 843 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AL591419.1-201ENST00000427423 339 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC091959.2-201ENST00000477363 321 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 APOOP4-201ENST00000513530 597 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 RNU6-416P-201ENST00000516265 103 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 SNORA76.2-201ENST00000517095 137 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC019227.1-201ENST00000526902 510 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC106785.1-201ENST00000565935 262 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC015917.1-201ENST00000579654 510 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC093227.2-201ENST00000589357 285 ntBASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.6□□□□□ -1.99
RBFOX3A6NFN3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms