Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNY3P10-201ENST00000384764 102 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC011933.1-201ENST00000413334 321 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 RPS7P13-201ENST00000413955 498 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 MTCO2P34-201ENST00000421994 607 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AL389915.1-201ENST00000422463 466 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 RPS27AP14-201ENST00000422868 454 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 RPS24P1-201ENST00000438550 371 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC009963.2-201ENST00000453431 138 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC116533.1-201ENST00000459748 321 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SL459P-201ENST00000481078 302 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 POU5F1P7-201ENST00000508759 541 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC079140.3-201ENST00000511111 550 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 MTND5P4-201ENST00000514978 288 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 COX6CP8-201ENST00000522620 226 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC083760.1-201ENST00000589621 670 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC234771.5-201ENST00000600161 514 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC008745.1-201ENST00000604064 271 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC239868.4-201ENST00000608318 671 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC103591.3-201ENST00000608684 209 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC013562.2-201ENST00000611632 603 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AC006971.1-201ENST00000407916 4486 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 FGF7P2-201ENST00000332473 296 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 Y_RNA.559-201ENST00000384686 107 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MIR1305-201ENST00000408300 86 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 EIF4A1P3-201ENST00000411521 244 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MTCO3P41-201ENST00000414801 328 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 CDK8P2-201ENST00000415020 547 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 FNDC3CP-201ENST00000420795 1155 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 COX6CP17-201ENST00000421389 185 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL138785.1-201ENST00000425821 331 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC008065.1-201ENST00000428525 348 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 BTF3P10-201ENST00000433415 495 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MUPP-201ENST00000438111 566 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC108475.1-201ENST00000507880 950 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AP004247.1-201ENST00000531556 1289 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 CR383656.6-201ENST00000550518 394 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC068446.3-201ENST00000555285 382 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AGGF1P4-201ENST00000568249 801 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MIR5684-201ENST00000585074 65 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL451044.1-201ENST00000604867 238 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL356218.2-201ENST00000605264 187 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC097468.3-201ENST00000607956 456 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC128687.2-201ENST00000609657 566 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AP000254.1-201ENST00000609934 520 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC100793.4-201ENST00000613683 429 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC114781.5-201ENST00000615297 108 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC009318.4-201ENST00000620496 486 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL445264.1-201ENST00000621719 171 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 MIR4727-201ENST00000622232 55 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TCRBV7S3A2A0A539 AL356473.1-201ENST00000406203 1408 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL022578.1-201ENST00000439330 1433 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms