Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AF186996.5-201ENST00000418098 904 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 FABP7P1-201ENST00000424004 391 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 BX323845.1-201ENST00000432417 179 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 HMGB3P9-201ENST00000441799 583 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AL022238.1-201ENST00000442557 355 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL7P15-201ENST00000461190 712 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 RPS4XP18-201ENST00000495480 763 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 PTGES3P3-201ENST00000511479 482 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC105031.1-201ENST00000518550 476 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 SETP7-201ENST00000552169 453 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 ZNF519P2-201ENST00000557032 169 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC136619.2-201ENST00000563361 631 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC107954.1-201ENST00000565906 727 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009101.1-201ENST00000568135 242 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 TVP23CP2-201ENST00000571473 623 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR4697-201ENST00000582977 78 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 DUXAP4-201ENST00000603046 613 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AL451044.1-201ENST00000604867 238 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC055876.5-201ENST00000605667 259 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC019193.2-201ENST00000610012 634 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC026368.1-201ENST00000614934 690 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 U6atac.1-201ENST00000616025 117 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009159.1-201ENST00000618386 642 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR7703-201ENST00000620784 77 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC095031.1-201ENST00000623685 672 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 BMS1P21-201ENST00000634565 365 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC095050.2-201ENST00000510748 1458 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009902.3-201ENST00000606235 2172 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 RNU6-517P-201ENST00000384362 110 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 RN7SKP235-201ENST00000410662 305 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC245052.5-201ENST00000416320 649 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 DNAJC19P7-201ENST00000428811 344 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 OR2B7P-201ENST00000429302 934 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CKS1BP5-201ENST00000434172 273 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC093414.1-201ENST00000434712 514 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL031667.1-201ENST00000440222 725 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC114495.1-201ENST00000441274 436 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC073587.1-201ENST00000447093 876 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 BX842559.2-201ENST00000451418 605 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 SNORD121B-201ENST00000458838 81 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 RN7SL459P-201ENST00000481078 302 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL117351.2-201ENST00000513571 157 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms