Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 MTND5P7-201ENST00000413558 1798 ntBASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 AOX3P-204ENST00000491025 2107 ntBASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 AC073365.1-203ENST00000641055 1992 ntBASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB11Q9Y5F2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 SAMMSON-210ENST00000641260 1308 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC034229.2-201ENST00000566945 2508 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 Y_RNA.106-201ENST00000363189 100 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-306P-201ENST00000384617 107 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 SNORA41-201ENST00000384675 132 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 RPL21P24-201ENST00000413752 448 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC007562.1-201ENST00000421819 517 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 USP9YP30-201ENST00000430729 455 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 OR3D1P-201ENST00000438288 955 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 NOTCH2P1-201ENST00000443481 624 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AP001086.1-201ENST00000494882 321 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 RN7SL101P-201ENST00000496350 279 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC090958.1-201ENST00000511122 351 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 RFPL4AP5-201ENST00000514977 504 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 HMGN1P28-201ENST00000521340 364 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC023157.2-201ENST00000540596 141 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC091516.1-201ENST00000549191 703 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC026371.1-201ENST00000551867 419 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 SETP7-201ENST00000552169 453 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC007956.1-201ENST00000555623 542 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC027229.1-201ENST00000583887 253 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 NPIPB1P-202ENST00000588786 828 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC004805.2-201ENST00000605382 482 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AL022394.1-201ENST00000606979 292 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AL161423.1-201ENST00000613700 262 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AL118522.2-201ENST00000616045 615 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC127024.6-201ENST00000621598 424 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC116667.2-201ENST00000641075 823 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC024651.2-201ENST00000562480 2098 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 SNX18P3-202ENST00000565670 1750 ntBASIC6.01□□□□□ -1.45
PCDHB11Q9Y5F2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AL137003.2-201ENST00000606924 2538 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC008758.3-201ENST00000507003 1829 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AP001541.1-201ENST00000623322 1904 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 Y_RNA.2-201ENST00000362330 96 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 Y_RNA.210-201ENST00000364161 110 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNVU1-3-201ENST00000364313 161 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-715P-201ENST00000365204 103 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-637P-201ENST00000384050 107 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-472P-201ENST00000384299 107 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-713P-201ENST00000384761 107 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RN7SKP229-201ENST00000410465 302 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-55P-201ENST00000411092 107 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC011933.1-201ENST00000413334 321 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 MRPS21P3-201ENST00000436696 262 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms