Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KRT19P6-201ENST00000510983 209 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 SNORA31.9-201ENST00000516429 84 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 OR4A45P-201ENST00000529954 901 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC020634.1-201ENST00000608701 549 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC027807.2-201ENST00000616099 408 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC022106.2-201ENST00000620114 757 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 CR381653.2-201ENST00000624041 768 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC022031.1-201ENST00000585985 2593 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CTDP1Q9Y5B0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CTDP1Q9Y5B0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AL031985.3-201ENST00000565390 2449 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RN7SKP226-201ENST00000364912 300 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 Y_RNA.390-201ENST00000383932 102 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 MIR181A1-201ENST00000385026 110 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC109780.2-201ENST00000413467 845 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AL136133.1-201ENST00000413694 376 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 CYCSP10-201ENST00000417973 294 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 OFD1P18Y-201ENST00000420889 959 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 GLRXP1-201ENST00000423261 334 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 ZNF863P-201ENST00000426746 417 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 BMS1P19-201ENST00000433925 393 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RPS27AP15-201ENST00000447672 466 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC012671.1-201ENST00000451912 203 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RPL18AP17-201ENST00000455326 198 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RPS27AP17-201ENST00000463344 455 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 S100A11P1-201ENST00000477525 312 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC025674.1-201ENST00000507074 324 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 PARP4P3-201ENST00000510265 317 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-528P-201ENST00000516926 100 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 SERPINE4P-201ENST00000554978 281 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 MIR4719-201ENST00000585233 84 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AP000860.1-201ENST00000605250 559 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC098614.4-201ENST00000607601 462 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC004067.1-201ENST00000608733 700 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC091304.9-201ENST00000612091 226 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC091834.1-201ENST00000614543 472 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC114781.5-201ENST00000615297 108 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC007014.2-201ENST00000615581 479 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC067931.1-201ENST00000624190 671 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC120349.2-201ENST00000625002 298 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AL157786.1-207ENST00000627771 695 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 ASNSP1-204ENST00000641977 1664 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 MAPK10-303ENST00000641324 3959 ntBASIC5.21□□□□□ -1.58
CTDP1Q9Y5B0 AC119744.1-201ENST00000454746 1715 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 HMGN1P14-201ENST00000412459 517 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 HMGB1P11-201ENST00000413899 637 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 HMGB3P23-201ENST00000414981 585 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 MTCO3P1-205ENST00000422088 832 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RPS12P5-201ENST00000423449 371 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC244505.5-201ENST00000443639 207 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC098824.1-201ENST00000453565 980 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 SNRPFP4-201ENST00000456366 242 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 SNORD42A-201ENST00000459584 64 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RN7SL98P-201ENST00000462271 300 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms