Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC130650.2-201ENST00000618736 2403 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC008432.1-201ENST00000615912 1320 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 OR5T3-201ENST00000303059 1023 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 RNU1-75P-201ENST00000347264 129 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 FRG1CP-201ENST00000358464 769 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TMSB4XP8-201ENST00000402089 135 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 OR51A3P-201ENST00000413596 924 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TMSB4XP6-201ENST00000415187 135 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TMSB4XP1-201ENST00000424567 135 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 MTATP6P4-201ENST00000427725 675 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 RPS26P30-201ENST00000443431 335 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC006539.3-201ENST00000454258 129 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 PLGLA-201ENST00000465668 449 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 RPL7P5-201ENST00000471472 736 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AP002884.2-201ENST00000471647 395 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 RPS4XP22-201ENST00000480755 780 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 VPS26AP1-201ENST00000483197 979 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 ERHP1-201ENST00000523006 310 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC005951.1-201ENST00000576706 485 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC006116.10-201ENST00000591836 581 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AL162574.2-201ENST00000614618 657 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC110801.1-201ENST00000623590 212 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC095031.1-201ENST00000623685 672 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AP003122.6-201ENST00000623831 495 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 AC139713.2-210ENST00000641741 992 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 ZNF663P-202ENST00000641770 1131 ntBASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RHBDD3Q9Y3P4 SRP72P2-201ENST00000344851 1979 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AL359837.1-201ENST00000381357 287 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 USP9YP36-201ENST00000424581 829 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 VN1R42P-201ENST00000424651 344 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 RPL7P46-201ENST00000425129 740 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 UBE2V1P6-201ENST00000430840 422 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AL035246.1-201ENST00000433554 1255 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 CDC27P1-201ENST00000445384 715 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 MTND2P19-201ENST00000449129 1012 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 SNORD105B-201ENST00000458770 79 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC089999.1-201ENST00000460336 374 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC091179.1-201ENST00000461606 579 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC108729.2-201ENST00000476543 840 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 RN7SKP18-201ENST00000516005 275 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 SNORA76.2-201ENST00000517095 137 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 HMGB1P1-201ENST00000522557 636 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 GTF2IP22-201ENST00000554443 182 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC011492.1-201ENST00000600023 315 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC022509.4-201ENST00000621404 572 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC098679.5-201ENST00000624394 571 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms