Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 AP000275.1-201ENST00000411943 390 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 TATDN1P1-201ENST00000414123 891 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 RPL7P10-201ENST00000417407 739 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 HMGB3P14-201ENST00000494195 599 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 MZT1P2-201ENST00000604387 248 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 AP000255.1-201ENST00000610276 676 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 PLCE1P1-201ENST00000622094 305 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 MTND5P28-201ENST00000438005 1594 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 PABPC1P9-201ENST00000426076 1612 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 MIR4452-201ENST00000583004 71 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 BNIP3P26-201ENST00000600827 554 ntBASIC1.15□□□□□ -2.22
MACF1Q9UPN3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
MACF1Q9UPN3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 VN1R8P-201ENST00000407739 893 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MIR1468-201ENST00000410600 86 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 RPL23AP89-201ENST00000439324 255 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC007536.1-201ENST00000533382 349 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 RNA5SP322-201ENST00000363617 119 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC008171.1-201ENST00000395058 200 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 NIPA2P2-201ENST00000496376 1083 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC126177.8-201ENST00000618339 1015 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 SCGB1D5P-201ENST00000515134 247 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MTCYBP28-201ENST00000566728 1132 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 DPRXP4-201ENST00000578053 568 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC011460.1-201ENST00000636268 1834 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AL136164.4-201ENST00000625013 2135 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 MIR518C-201ENST00000384822 101 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC010401.1-201ENST00000463867 348 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC243972.3-201ENST00000539655 198 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC087190.4-201ENST00000574616 8334 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC004972.1-201ENST00000623934 2209 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC110994.2-201ENST00000635481 492 ntBASIC1.15□□□□□ -2.23
MACF1Q9UPN3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.15□□□□□ -2.23
MACF1Q9UPN3 AC138915.3-201ENST00000562908 1389 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 RNA5SP42-201ENST00000364278 115 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.457-201ENST00000384237 111 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 RPL7P25-201ENST00000404151 721 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 RPL7P8-201ENST00000411964 730 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 FCF1P1-201ENST00000432690 571 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 MIR5047-201ENST00000579212 100 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AC025263.3-201ENST00000622965 1396 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 RNA5SP227-201ENST00000516184 113 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.684-201ENST00000516510 99 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AC107934.2-201ENST00000518653 310 ntBASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.14□□□□□ -2.23
MACF1Q9UPN3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms