Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
ZNRF3Q9ULT6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ZNRF3Q9ULT6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ZNRF3Q9ULT6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.7□□□□□ -1.5
ZNRF3Q9ULT6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 MAPK10-328ENST00000641553 4009 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RNU6-343P-201ENST00000364709 104 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 MT-TL1-201ENST00000386347 75 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 SSXP10-201ENST00000402595 565 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC073136.2-201ENST00000417282 849 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC114755.5-201ENST00000447760 831 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AL359073.1-201ENST00000448036 403 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC005297.2-201ENST00000450430 606 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RPL7P15-201ENST00000461190 712 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 APOOP2-201ENST00000461561 539 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RPL21P126-201ENST00000470049 478 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC008628.2-201ENST00000502605 298 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 TXNP6-201ENST00000510190 310 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC016559.2-201ENST00000510759 359 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 Y_RNA.693-201ENST00000516641 110 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 Vault.3-201ENST00000516676 95 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 IGLVIV-65-201ENST00000517313 360 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 CYCSP29-201ENST00000533731 318 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC107954.1-201ENST00000565906 727 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC099489.2-201ENST00000574976 260 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RPL23AP92-201ENST00000603609 255 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC121334.2-201ENST00000605387 271 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC139792.3-201ENST00000623525 224 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC009229.4-201ENST00000623854 1947 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 KPNA2P2-201ENST00000419546 1489 ntBASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNRF3Q9ULT6 AC020633.1-201ENST00000468439 2247 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL354685.2-201ENST00000448218 1447 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC021146.4-201ENST00000309229 279 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 Y_RNA.11-201ENST00000362375 109 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 RNU6-28P-201ENST00000362378 107 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 RNU6-730P-201ENST00000383954 104 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 SNORA5.1-201ENST00000384275 131 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 MTND3P17-201ENST00000416968 344 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL353777.1-201ENST00000425552 326 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 MTCO2P11-201ENST00000431069 680 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC092162.1-201ENST00000432828 434 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC098614.3-201ENST00000438957 440 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC239809.1-201ENST00000450470 217 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 HMGB1P15-201ENST00000453854 435 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 RN7SL810P-201ENST00000493031 276 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC079382.1-201ENST00000493346 557 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 FTH1P24-201ENST00000503502 462 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC104057.1-201ENST00000515547 497 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 RNU6-507P-201ENST00000516045 100 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 SNORA31.9-201ENST00000516429 84 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 MIR2116-201ENST00000517221 80 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AP003034.1-201ENST00000534621 422 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC025884.1-201ENST00000556034 378 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 FGF7P1-201ENST00000582820 288 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL353997.4-201ENST00000586196 166 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC060780.3-201ENST00000589464 80 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 NRBF2P5-201ENST00000603087 788 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AL365503.1-201ENST00000605247 905 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC055876.5-201ENST00000605667 259 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC008945.2-201ENST00000606056 604 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.68□□□□□ -1.5
ZNRF3Q9ULT6 AC104260.1-201ENST00000616660 539 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms