Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AC010928.3-201ENST00000587712 541 ntBASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AC006557.5-201ENST00000603126 811 ntBASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AC091953.5-201ENST00000622919 233 ntBASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 MIR3651-201ENST00000630427 90 ntBASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP2Q9UDT6 AC092326.2-201ENST00000624772 1561 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC021755.1-201ENST00000559747 1447 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL157700.1-201ENST00000561973 1432 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 BX664727.1-201ENST00000416024 466 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 EI24P1-201ENST00000416584 867 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 UBE2D3P3-201ENST00000426992 425 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 GTF2IP12-201ENST00000456547 356 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 snoU13.7-201ENST00000459220 104 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC008379.1-201ENST00000463655 464 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 RN7SL807P-201ENST00000470923 297 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC021678.1-201ENST00000505195 936 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 PHBP14-201ENST00000512887 367 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 UBE2NP1-201ENST00000545592 458 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC008507.1-201ENST00000587506 734 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC091488.1-201ENST00000604239 660 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL162713.1-201ENST00000604480 262 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 BNIP3P4-201ENST00000604946 565 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL354976.1-201ENST00000613843 387 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 AC080188.3-201ENST00000624842 748 ntBASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP2Q9UDT6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AP002784.2-201ENST00000397300 549 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 RNA5SP31-201ENST00000411144 127 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 HMGN1P24-201ENST00000412282 298 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 GLRXP1-201ENST00000423261 334 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AL357552.1-201ENST00000445254 415 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC233982.1-201ENST00000451247 436 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 RPL12P26-201ENST00000452430 487 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 RPL32P14-201ENST00000463196 378 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 RPL21P13-201ENST00000488305 481 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 MTCO2P9-201ENST00000503214 694 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 MIR2276-201ENST00000516886 89 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 RNU6-467P-201ENST00000517027 110 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 MIR4276-201ENST00000584832 70 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC005776.1-201ENST00000603164 290 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC016542.1-201ENST00000608259 493 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AC090425.2-201ENST00000608818 501 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 MIR7112-201ENST00000616126 65 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 PLCE1P1-201ENST00000622094 305 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 AL109659.3-201ENST00000624985 950 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 MTND4P8-201ENST00000514997 1362 ntBASIC3.96□□□□□ -1.78
CLIP2Q9UDT6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC007256.1-201ENST00000392253 2765 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms