Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.28□□□□□ -1.72
LRFN1Q9P244 MTCYBP41-201ENST00000528913 1123 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AP001781.1-201ENST00000530977 207 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.28□□□□□ -1.72
LRFN1Q9P244 CR383656.7-201ENST00000548164 174 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC084824.1-201ENST00000550917 1005 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC126177.3-201ENST00000551839 688 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 FKBP1BP1-201ENST00000553366 325 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 NBR2-204ENST00000587322 63 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC022916.3-201ENST00000592961 742 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 RPL12P25-202ENST00000598100 674 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 PRELID3BP8-201ENST00000604148 295 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AL590099.1-201ENST00000615276 138 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC009237.17-201ENST00000618111 748 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 AC138649.5-201ENST00000637456 137 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN1Q9P244 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.72
LRFN1Q9P244 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
LRFN1Q9P244 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.28□□□□□ -1.72
LRFN1Q9P244 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN1Q9P244 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN1Q9P244 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN1Q9P244 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC108751.5-201ENST00000492880 1336 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 PNPT1P2-201ENST00000456768 2050 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 RNY4P24-201ENST00000362735 96 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 RNU6-1155P-201ENST00000363554 107 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 SNORA7.2-201ENST00000364446 145 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 Y_RNA.548-201ENST00000384656 105 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 RAD23BP2-201ENST00000416003 1207 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC004690.1-201ENST00000418216 328 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 RPL36AP10-201ENST00000421785 322 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC004938.1-201ENST00000438468 308 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 RPL7P36-201ENST00000444633 681 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AL031584.1-201ENST00000447169 754 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC104308.1-201ENST00000454621 333 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC116337.2-201ENST00000477662 156 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 RNA5SP249-201ENST00000516127 99 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC087477.6-201ENST00000559595 843 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 CYCSP40-201ENST00000575927 294 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC083760.1-201ENST00000589621 670 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC015726.1-201ENST00000602353 681 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC020910.2-201ENST00000603635 610 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AC245008.1-201ENST00000608123 476 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 AL133243.1-201ENST00000614487 366 ntBASIC4.27□□□□□ -1.73
LRFN1Q9P244 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN1Q9P244 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN1Q9P244 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC139713.2-214ENST00000642059 1811 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL121657.1-201ENST00000327215 531 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL138880.1-201ENST00000405824 642 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 U3.35-201ENST00000408405 208 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 RNA5SP239-201ENST00000410218 129 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 TOMM22P1-201ENST00000418578 312 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL137014.1-201ENST00000420490 1226 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 CYCSP46-201ENST00000423569 204 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 OR8F1P-201ENST00000425243 930 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 RPS6P12-201ENST00000432491 726 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms