Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-628P-201ENST00000410675 107 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AL133384.1-201ENST00000412744 351 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AL049610.1-201ENST00000423374 372 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 EIF1P3-201ENST00000423841 334 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 OR6C5P-201ENST00000452388 923 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 USP9YP10-201ENST00000454868 628 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC010625.1-201ENST00000511296 403 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 USP9YP5-201ENST00000511770 630 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC022447.1-201ENST00000515358 464 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 SLC2A13P1-201ENST00000531560 322 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 OR8R1P-201ENST00000543943 764 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AGGF1P4-201ENST00000568249 801 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC068790.6-201ENST00000602558 258 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC112220.3-201ENST00000605502 502 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AL359715.5-201ENST00000623431 443 ntBASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCKIPSDQ9NZQ3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
NCKIPSDQ9NZQ3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC008033.1-201ENST00000216407 1162 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 MIR331-201ENST00000362302 94 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 SNORA4.1-201ENST00000364263 144 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 MIR506-201ENST00000384998 124 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 TPT1P2-201ENST00000413105 503 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL391219.1-201ENST00000422570 483 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 OR51AB1P-201ENST00000429046 620 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 PSMA2P3-201ENST00000429685 675 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL37P6-202ENST00000464216 403 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092757.1-201ENST00000467293 467 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL35AP15-201ENST00000468042 339 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC041039.1-201ENST00000485656 536 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC068724.1-201ENST00000487100 792 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 RNF138P1-201ENST00000502765 546 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 HMGB1P28-201ENST00000507778 552 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC017037.1-201ENST00000508460 471 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC016065.2-201ENST00000514530 444 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 RNY4P37-201ENST00000516225 96 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 OR4A12P-201ENST00000530847 918 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC022880.1-201ENST00000534017 973 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC008127.2-201ENST00000549925 1075 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC012435.1-202ENST00000568772 240 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 ROCK1P1-201ENST00000573767 549 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC006270.3-201ENST00000605967 1036 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AP001521.1-201ENST00000609150 300 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC078899.5-201ENST00000612475 178 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms