Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RNU6-339P-201ENST00000384310 107 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 HMGB3P20-201ENST00000417997 600 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RPL31P12-201ENST00000422587 358 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 FAM204CP-201ENST00000424489 642 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RAB11AP1-201ENST00000442978 646 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RN7SL807P-201ENST00000470923 297 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC108729.2-201ENST00000476543 840 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AP000889.1-201ENST00000530968 660 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AL121603.1-201ENST00000553815 142 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 RPL21P12-201ENST00000559810 515 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC079880.2-201ENST00000603790 1213 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC096586.1-201ENST00000610267 561 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AL354976.1-201ENST00000613843 387 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC068722.2-201ENST00000618734 544 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 AC097372.4-201ENST00000625025 466 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 MIR7153-201ENST00000637758 57 ntBASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TM9SF3Q9HD45 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC025263.3-201ENST00000622965 1396 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AL591034.1-201ENST00000407447 340 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 HSFY4P-201ENST00000415994 1181 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 PAICSP7-201ENST00000419829 962 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AL591503.2-201ENST00000442314 1005 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC099563.1-201ENST00000456086 418 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC010468.1-201ENST00000461022 817 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC017015.1-201ENST00000477387 286 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 SETP6-201ENST00000479329 568 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 MTCYBP37-201ENST00000510642 1133 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 GTF2IP8-201ENST00000560687 584 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC074051.3-201ENST00000570238 358 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC040174.2-201ENST00000602701 465 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC025588.3-201ENST00000604182 274 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC016542.1-201ENST00000608259 493 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC099778.2-201ENST00000610904 211 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC018755.4-201ENST00000619715 454 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
TM9SF3Q9HD45 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.53□□□□□ -1.85
TM9SF3Q9HD45 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms