Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 DUXAP6-201ENST00000553858 601 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 MIR3944-201ENST00000581277 108 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC005255.1-201ENST00000593748 216 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 Z99129.2-201ENST00000619967 314 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 DDX43P2-201ENST00000604753 1354 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AL031985.3-201ENST00000565390 2449 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RNA5SP502-201ENST00000362694 119 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 SNORD82-201ENST00000365530 70 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RNU6-878P-201ENST00000384578 110 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RPL23AP29-201ENST00000397284 453 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 USP9YP33-201ENST00000412220 421 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RPS6P15-201ENST00000431996 751 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 USP9YP35-201ENST00000435696 412 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 ARPC3P5-201ENST00000448802 534 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 MTND1P31-201ENST00000449206 961 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AL109741.2-201ENST00000455561 343 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC108145.1-201ENST00000503770 153 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 MTCO3P44-201ENST00000510977 541 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AP000926.4-201ENST00000527351 454 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 PHBP17-201ENST00000528576 541 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 ZNF321P-202ENST00000550843 495 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 RN7SL703P-201ENST00000578485 302 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC020914.4-201ENST00000597690 277 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 BNIP3P11-201ENST00000603878 563 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC112230.1-201ENST00000604342 547 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AL160290.3-201ENST00000604869 165 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 Z98200.1-201ENST00000607298 470 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC231657.1-201ENST00000624313 397 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 OR6C71P-202ENST00000641886 1107 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 OR11H5P-202ENST00000641612 1325 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 AC027287.1-201ENST00000553115 1453 ntBASIC4.09□□□□□ -1.75
POLR1BQ9H9Y6 NUP58P1-201ENST00000502546 1738 ntBASIC4.09□□□□□ -1.76
POLR1BQ9H9Y6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR1BQ9H9Y6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR1BQ9H9Y6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
POLR1BQ9H9Y6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 AL583835.1-201ENST00000399570 407 ntBASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 RNA5SP56-201ENST00000410277 118 ntBASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 AL953862.1-201ENST00000423016 168 ntBASIC4.08□□□□□ -1.76
POLR1BQ9H9Y6 EIF1P3-201ENST00000423841 334 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms