Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 MTND5P35-201ENST00000557537 1720 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 SNORA12.1-201ENST00000390873 148 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 RPSAP72-201ENST00000407020 358 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC128677.1-201ENST00000436016 442 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AL391987.1-201ENST00000441025 200 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC074290.1-201ENST00000448883 135 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 PRDX1P1-201ENST00000449329 596 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 RN7SL654P-201ENST00000479178 292 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC005726.1-201ENST00000494679 427 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 RN7SKP179-201ENST00000516126 217 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC055872.1-201ENST00000570978 278 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 MIR6886-201ENST00000619864 61 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 uc_338.21-201ENST00000622458 147 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 CR392039.4-201ENST00000624968 501 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 LRRC37A16P-202ENST00000586022 3725 ntBASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCAF1Q9H7N4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 AC005618.1-201ENST00000606901 3148 ntBASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SCAF1Q9H7N4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 RN7SKP237-201ENST00000364663 301 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 HSPE1P8-201ENST00000406997 288 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 MRPS10P1-201ENST00000448483 130 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 FRG2FP-204ENST00000453982 852 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 RPS26P21-201ENST00000475397 348 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 AC005017.1-201ENST00000482002 490 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 AC124945.1-201ENST00000485133 188 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 MIR378C-201ENST00000578683 81 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 MIR3658-201ENST00000636291 56 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 MAPK10-287ENST00000641217 3037 ntBASIC10.27□□□□□ -0.77
SCAF1Q9H7N4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 Y_RNA.495-201ENST00000384435 112 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 RN7SKP91-201ENST00000410852 288 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 RNU5A-5P-201ENST00000411054 116 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 RPS23P10-201ENST00000416185 486 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 RBMY2TP-201ENST00000451162 947 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 AC006512.2-201ENST00000543250 486 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 MIR5692A1-201ENST00000580523 69 ntBASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCAF1Q9H7N4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AL121768.1-201ENST00000613917 2544 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC022905.1-201ENST00000503430 3048 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 RNA5SP152-201ENST00000365184 110 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 RNA5SP176-201ENST00000390956 110 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 RNU2-15P-201ENST00000410692 191 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 OR2A1-AS1-202ENST00000467944 422 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC010683.1-201ENST00000473673 378 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 COX7A2P2-201ENST00000505291 250 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC113367.2-201ENST00000505749 160 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC108471.1-201ENST00000513977 287 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 RNU6-612P-201ENST00000516909 102 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC104581.2-201ENST00000572227 430 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC010463.3-201ENST00000594077 500 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 MIR8076-201ENST00000611401 83 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms