Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC246680.2-201ENST00000422106 389 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC241520.1-201ENST00000422654 1099 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 RNF2P1-201ENST00000442955 1010 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AL929288.2-201ENST00000446368 407 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 SEPT14P24-201ENST00000447236 180 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 FCF1P6-201ENST00000456841 595 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 RNU7-140P-201ENST00000459546 60 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 PRDX3P4-201ENST00000470828 747 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 RPS3AP43-201ENST00000479743 781 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 RNA5SP217-201ENST00000515959 91 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC010306.1-201ENST00000523223 1117 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC087894.1-201ENST00000538359 518 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC010735.1-201ENST00000567305 1026 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 MIR4458-201ENST00000578872 75 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC008507.1-201ENST00000587506 734 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC099785.1-201ENST00000605697 437 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AL442067.2-201ENST00000614033 363 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AC092608.3-201ENST00000625017 386 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 MIR3651-201ENST00000630427 90 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 AL356118.1-201ENST00000635272 1078 ntBASIC3.73□□□□□ -1.81
RNF41Q9H4P4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RNF41Q9H4P4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AL512646.1-201ENST00000269395 1077 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RPL7P26-201ENST00000333817 754 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RNA5SP383-201ENST00000362934 120 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RNU6-353P-201ENST00000364266 108 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC096533.1-201ENST00000411645 353 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC007899.1-201ENST00000412776 775 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RPL32P35-201ENST00000415214 394 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AL512649.1-201ENST00000428997 581 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 ELOCP11-201ENST00000436690 332 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 ELOCP16-201ENST00000444494 332 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 MTND1P33-201ENST00000446251 917 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RPL30P11-201ENST00000495304 339 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC026414.1-201ENST00000504046 698 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC104108.1-201ENST00000509930 412 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC010374.2-201ENST00000512933 535 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 RNU6-416P-201ENST00000516265 103 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 SNORA64.4-201ENST00000516632 81 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 PDCL2P2-201ENST00000533651 189 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC006518.2-201ENST00000542513 940 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 PCNAP1-202ENST00000595299 752 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AL139022.2-201ENST00000606934 443 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC018754.1-201ENST00000607486 925 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AL391834.2-201ENST00000609982 546 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC099506.2-201ENST00000623074 221 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC004808.1-201ENST00000627671 721 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 AC017104.5-201ENST00000637647 639 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 MTCO1P6-201ENST00000481192 1384 ntBASIC3.72□□□□□ -1.81
RNF41Q9H4P4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RNF41Q9H4P4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNF41Q9H4P4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC073055.1-201ENST00000456901 1621 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 RNA5SP387-201ENST00000364226 106 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 SNORD15B-201ENST00000384714 146 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 DNAJC19P6-201ENST00000401853 280 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 RPL31P12-201ENST00000422587 358 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC108734.1-201ENST00000439549 399 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms