Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AL357552.1-201ENST00000445254 415 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 HMGB1P48-201ENST00000446155 598 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RPS29P33-201ENST00000456717 146 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 MTCO2P6-201ENST00000463134 685 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC011979.1-201ENST00000472300 483 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RN7SL283P-201ENST00000489055 303 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC084024.2-201ENST00000503480 791 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RNU6-488P-201ENST00000515918 99 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RN7SKP82-201ENST00000516786 223 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RN7SKP96-201ENST00000516948 297 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 MRPL49P2-201ENST00000521066 465 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC104027.1-201ENST00000521887 300 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AADACP1-206ENST00000561502 1193 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC017100.2-201ENST00000584628 355 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC061975.8-201ENST00000587058 721 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC245036.5-201ENST00000596330 847 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC068790.4-201ENST00000602474 263 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 GAS5-AS1-201ENST00000602767 694 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC105429.2-201ENST00000610567 517 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AL357559.1-201ENST00000622228 274 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC112484.5-201ENST00000624189 228 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 RNU6-560P-201ENST00000364007 108 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 SNORA48.8-201ENST00000391324 134 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 HNRNPDP2-201ENST00000406475 478 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC245028.1-201ENST00000423259 256 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 Z93242.1-201ENST00000427102 353 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC068587.2-201ENST00000478386 781 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 SETP14-201ENST00000497538 873 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC034244.1-201ENST00000507687 207 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 POU5F1P7-201ENST00000508759 541 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC005921.1-201ENST00000510589 286 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 RPL7L1P13-201ENST00000511702 739 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC093755.1-201ENST00000512950 1023 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC010265.1-201ENST00000513509 211 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 MRPS36P3-201ENST00000519284 130 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AP001207.1-201ENST00000524051 481 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC025884.1-201ENST00000556034 378 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC091057.2-201ENST00000602594 792 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LLPHP1-201ENST00000603571 367 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 Z99289.3-201ENST00000605586 594 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC023158.2-201ENST00000614876 543 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC022509.4-201ENST00000621404 572 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 AC097655.1-201ENST00000635075 318 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 XPOTP1-201ENST00000443317 2398 ntBASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC28BQ9BUN5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms