Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SMOQ99835 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.62□□□□□ -1.67
SMOQ99835 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.62□□□□□ -1.67
SMOQ99835 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMOQ99835 EOGT-210ENST00000615922 1931 ntBASIC4.62□□□□□ -1.67
SMOQ99835 AC126323.6-202ENST00000568092 3511 ntBASIC4.62□□□□□ -1.67
SMOQ99835 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 RNU1-132P-201ENST00000364300 164 ntBASIC4.61□□□□□ -1.67
SMOQ99835 RNU6-343P-201ENST00000364709 104 ntBASIC4.61□□□□□ -1.67
SMOQ99835 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 MIR1305-201ENST00000408300 86 ntBASIC4.61□□□□□ -1.67
SMOQ99835 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 AL139415.2-201ENST00000431968 163 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC023347.2-201ENST00000433994 462 ntBASIC4.61□□□□□ -1.67
SMOQ99835 PGBD4P3-201ENST00000440731 581 ntBASIC4.61□□□□□ -1.67
SMOQ99835 RBMX2P4-201ENST00000441256 376 ntBASIC4.61□□□□□ -1.67
SMOQ99835 RPL21P133-201ENST00000443666 476 ntBASIC4.61□□□□□ -1.67
SMOQ99835 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 BX322784.1-201ENST00000455793 1077 ntBASIC4.61□□□□□ -1.67
SMOQ99835 MTCO1P42-201ENST00000457379 726 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC087879.1-201ENST00000474343 374 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC004924.1-201ENST00000480160 781 ntBASIC4.61□□□□□ -1.67
SMOQ99835 HMGB1P36-201ENST00000487709 576 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC022447.3-201ENST00000506865 495 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 AC034159.1-201ENST00000513885 583 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.61□□□□□ -1.67
SMOQ99835 OR5AP1P-201ENST00000529730 940 ntBASIC4.61□□□□□ -1.67
SMOQ99835 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.61□□□□□ -1.67
SMOQ99835 RPL23AP97-201ENST00000568955 471 ntBASIC4.61□□□□□ -1.67
SMOQ99835 MIR5186-201ENST00000577504 120 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC009977.1-201ENST00000586015 570 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 AL354984.3-201ENST00000604803 325 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC090578.1-201ENST00000604955 591 ntBASIC4.61□□□□□ -1.67
SMOQ99835 Z98200.1-201ENST00000607298 470 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC109347.2-201ENST00000610220 349 ntBASIC4.61□□□□□ -1.67
SMOQ99835 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.61□□□□□ -1.67
SMOQ99835 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 AC009237.17-201ENST00000618111 748 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC068722.2-201ENST00000618734 544 ntBASIC4.61□□□□□ -1.67
SMOQ99835 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
SMOQ99835 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMOQ99835 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 AC000123.3-201ENST00000624029 4975 ntBASIC4.61□□□□□ -1.67
SMOQ99835 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMOQ99835 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
SMOQ99835 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 MAPK10-303ENST00000641324 3959 ntBASIC4.61□□□□□ -1.67
SMOQ99835 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.61□□□□□ -1.67
SMOQ99835 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMOQ99835 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 AL450326.2-201ENST00000421913 1962 ntBASIC4.6□□□□□ -1.67
SMOQ99835 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 AC083843.3-201ENST00000623679 2186 ntBASIC4.6□□□□□ -1.67
SMOQ99835 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
SMOQ99835 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
SMOQ99835 RPL23AP57-201ENST00000332361 466 ntBASIC4.6□□□□□ -1.67
SMOQ99835 Y_RNA.248-201ENST00000364501 109 ntBASIC4.6□□□□□ -1.67
SMOQ99835 Y_RNA.554-201ENST00000384672 102 ntBASIC4.6□□□□□ -1.67
SMOQ99835 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMOQ99835 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
SMOQ99835 RPS3AP3-201ENST00000411933 242 ntBASIC4.6□□□□□ -1.67
SMOQ99835 AC011933.1-201ENST00000413334 321 ntBASIC4.6□□□□□ -1.67
SMOQ99835 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.6□□□□□ -1.67
SMOQ99835 AL596276.1-201ENST00000434465 418 ntBASIC4.6□□□□□ -1.67
SMOQ99835 UBE2V1P8-201ENST00000437166 265 ntBASIC4.6□□□□□ -1.67
SMOQ99835 MTATP6P23-201ENST00000440153 476 ntBASIC4.6□□□□□ -1.67
SMOQ99835 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.6□□□□□ -1.67
SMOQ99835 PAXBP1P1-201ENST00000449315 447 ntBASIC4.6□□□□□ -1.67
SMOQ99835 AC239809.1-201ENST00000450470 217 ntBASIC4.6□□□□□ -1.67
SMOQ99835 snoU13.7-201ENST00000459220 104 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms