Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NUP88Q99567 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NUP88Q99567 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUP88Q99567 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 RNU6-878P-201ENST00000384578 110 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 MT-TC-201ENST00000387405 66 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 RNU6-952P-201ENST00000391164 108 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 SNORA74C-2-201ENST00000411179 201 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 TPMTP2-201ENST00000414372 726 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 MTATP6P27-201ENST00000416987 621 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP88Q99567 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP88Q99567 AC122718.1-201ENST00000439448 744 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AL512326.1-201ENST00000443050 721 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 AP000942.1-201ENST00000463969 747 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 FAM133DP-201ENST00000464802 691 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP88Q99567 AC093824.1-201ENST00000508796 343 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC068587.4-201ENST00000533893 186 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 OR6C7P-201ENST00000547875 934 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AL352979.3-201ENST00000553515 247 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP88Q99567 BNIP3P5-201ENST00000562290 498 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC106785.1-201ENST00000565935 262 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.98□□□□□ -1.61
NUP88Q99567 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP88Q99567 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP88Q99567 AC090582.1-201ENST00000636321 199 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 AL592437.2-201ENST00000421655 2434 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP88Q99567 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP88Q99567 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 ZNF734P-201ENST00000419494 1534 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
NUP88Q99567 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 RNU4-21P-201ENST00000362802 126 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 RNA5SP130-201ENST00000364431 114 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 RNU4-24P-201ENST00000364565 139 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 RNA5SP283-201ENST00000365604 119 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 RNU1-44P-201ENST00000384453 163 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 MIR1911-201ENST00000410783 80 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC012065.2-201ENST00000421295 375 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 PRELID3BP10-201ENST00000431957 584 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AL132765.1-201ENST00000434165 553 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC127537.2-201ENST00000439258 465 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 MTND5P14-201ENST00000441481 1267 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 COX6CP12-201ENST00000446748 202 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 EPS15P1-201ENST00000448836 336 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 RNU6-956P-201ENST00000458868 103 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP88Q99567 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 POU5F1P7-201ENST00000508759 541 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AC116347.2-201ENST00000514912 523 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 HIGD1AP3-201ENST00000515857 278 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP88Q99567 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AP004247.1-201ENST00000531556 1289 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC053481.3-201ENST00000577881 843 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP88Q99567 RSL24D1P11-201ENST00000591045 491 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 PRELID3BP8-201ENST00000604148 295 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AC090186.1-201ENST00000605991 572 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AP003117.2-201ENST00000606010 545 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 AC097468.3-201ENST00000607956 456 ntBASIC4.97□□□□□ -1.61
NUP88Q99567 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NUP88Q99567 AC025048.6-202ENST00000627667 438 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms