Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL161729.4-201ENST00000604650 476 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC090578.1-201ENST00000604955 591 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AP000860.1-201ENST00000605250 559 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 BCRP9-201ENST00000605312 388 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 CR381653.2-201ENST00000624041 768 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX18Q96RF0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX18Q96RF0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 OR11H5P-202ENST00000641612 1325 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 RNY3P14-201ENST00000384309 102 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 RNU6-178P-201ENST00000384631 104 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 HSPD1P16-201ENST00000402302 394 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL024474.1-201ENST00000404655 591 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 MIR1305-201ENST00000408300 86 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 CHEK2P3-201ENST00000416118 248 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 NUP35P2-201ENST00000416748 943 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 OR2AM1P-201ENST00000422137 422 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 USP9YP18-201ENST00000425912 695 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL445669.1-201ENST00000426743 755 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 NEK4P1-201ENST00000433383 879 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 MTND3P21-201ENST00000433774 331 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL353597.2-202ENST00000434901 373 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC073614.1-201ENST00000438690 650 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 FGF7P6-202ENST00000451282 293 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 MTCO1P42-201ENST00000457379 726 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC092324.1-201ENST00000468671 324 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL121769.1-201ENST00000469473 401 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC140172.1-201ENST00000502928 141 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC022447.3-201ENST00000506865 495 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC091133.4-201ENST00000511142 308 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC024589.1-201ENST00000512207 263 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 RNU6-430P-201ENST00000517078 107 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC100770.1-201ENST00000532310 322 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL049839.1-201ENST00000556151 657 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC087477.6-201ENST00000559595 843 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 VN1R79P-201ENST00000593540 513 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC090948.2-201ENST00000607363 564 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC080013.4-201ENST00000607624 649 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX18Q96RF0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL158209.2-201ENST00000619266 216 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AC087385.3-201ENST00000620477 187 ntBASIC4.29□□□□□ -1.72
SNX18Q96RF0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX18Q96RF0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX18Q96RF0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX18Q96RF0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX18Q96RF0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX18Q96RF0 ELL2P4-201ENST00000446870 1376 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX18Q96RF0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 AC099654.2-201ENST00000433031 1980 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 RN7SKP95-201ENST00000362860 303 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 RNU4-12P-201ENST00000365233 139 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SNX18Q96RF0 RNU6-769P-201ENST00000384407 104 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 SNORD115-47-201ENST00000391226 86 ntBASIC4.28□□□□□ -1.72
SNX18Q96RF0 AL031679.1-201ENST00000400616 525 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms