Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 OR4K12P-201ENST00000406538 961 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 NDUFB4P5-201ENST00000415445 361 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL645937.1-202ENST00000421799 937 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 HMGN2P27-201ENST00000427352 270 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR4F13P-201ENST00000428478 931 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR4K11P-201ENST00000431829 904 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 HMGB1P18-201ENST00000438801 619 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.632-201ENST00000459189 102 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RNU6-329P-201ENST00000459618 107 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RPS21P4-201ENST00000487122 248 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC105417.1-201ENST00000514691 285 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RNU6-327P-201ENST00000516270 127 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RNU6-1045P-201ENST00000516321 107 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RNU6-941P-201ENST00000516346 108 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.691-201ENST00000516611 103 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RN7SKP116-201ENST00000516902 319 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP005597.4-201ENST00000526762 229 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR4P1P-201ENST00000530808 1136 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 PSMA3P-201ENST00000555485 635 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RPL21P12-201ENST00000559810 515 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RPL10P14-201ENST00000565265 298 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR4K8P-201ENST00000578842 1048 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RN7SL356P-201ENST00000582228 248 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP001029.3-201ENST00000588063 596 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL512782.1-201ENST00000603093 364 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP000942.4-201ENST00000604811 241 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC021646.1-201ENST00000605469 484 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC010424.2-201ENST00000607594 443 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC130324.3-201ENST00000614165 542 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RNU5A-8P-201ENST00000364102 114 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.231-201ENST00000364358 102 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RNU6-39P-201ENST00000384344 107 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 DBIP1-201ENST00000401435 260 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 NPM1P18-201ENST00000434232 732 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC236972.2-201ENST00000434979 310 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 FTH1P1-201ENST00000437933 532 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 NOP56P2-201ENST00000447491 769 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 MTND3P16-201ENST00000452205 344 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC007547.1-201ENST00000462177 490 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AL049714.1-201ENST00000466686 347 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RN7SL177P-201ENST00000476596 299 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RPL5P22-201ENST00000480199 884 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RNU4-29P-201ENST00000515943 174 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC100784.1-201ENST00000522790 310 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC004853.1-201ENST00000604902 698 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms