Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC090515.3-201ENST00000560431 315 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 HMGB1P33-201ENST00000563485 527 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 MIR4675-201ENST00000577898 77 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 HMGN1P30-201ENST00000589286 268 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC091905.4-201ENST00000623432 202 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AP005264.7-201ENST00000625003 745 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC092079.1-201ENST00000558620 1985 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC009237.5-201ENST00000414271 501 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 TPMTP2-201ENST00000414372 726 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 CHEK2P3-201ENST00000416118 248 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC119751.6-201ENST00000416712 186 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 MTCYBP45-201ENST00000435243 565 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC092001.1-201ENST00000453012 261 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC087312.1-201ENST00000471411 480 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC008277.2-201ENST00000605196 797 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC009994.1-201ENST00000606889 253 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AC008536.2-201ENST00000607284 349 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AL355816.1-201ENST00000607951 118 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AL590282.1-201ENST00000610379 1136 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 FAM27B-201ENST00000610601 213 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 OR11H5P-202ENST00000641612 1325 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 EOGT-210ENST00000615922 1931 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CHAMP1Q96JM3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC016588.2-201ENST00000632484 3021 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC097504.1-201ENST00000515103 2415 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL442639.1-201ENST00000625030 1899 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL606537.1-201ENST00000607258 2011 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC107081.3-201ENST00000612715 2034 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 MT-TL1-201ENST00000386347 75 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 RNU4-55P-201ENST00000410731 137 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 RNU6-195P-201ENST00000411352 109 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 RSU1P3-201ENST00000412878 835 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 SKP1P1-201ENST00000438081 489 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 MTCO3P2-201ENST00000457365 171 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC026410.2-201ENST00000460281 156 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC023598.1-201ENST00000472521 361 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 OR52A4P-201ENST00000472867 958 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC010301.1-201ENST00000473936 355 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 RPL23AP72-201ENST00000492447 435 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 MTCYBP18-201ENST00000501056 747 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 RN7SKP96-201ENST00000516948 297 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC104383.1-201ENST00000530297 370 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL390334.1-201ENST00000556395 450 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL133457.1-201ENST00000564251 987 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms