Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL37P18-201ENST00000411602 243 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 TOMM22P1-201ENST00000418578 312 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC012065.2-201ENST00000421295 375 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 BRWD1P3-201ENST00000428816 390 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 NEK4P1-201ENST00000433383 879 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 RPL23AP74-201ENST00000437246 471 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 RPL21P134-201ENST00000453468 483 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 snoU13.1-201ENST00000459157 104 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC011276.1-201ENST00000469688 323 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 NCOR1P1-202ENST00000486162 291 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 HMGB1P22-201ENST00000505315 124 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC112673.1-201ENST00000513168 575 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 MTND2P38-201ENST00000522536 667 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AC114878.2-201ENST00000604863 1251 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 AP000484.1-201ENST00000620067 1252 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC012618.3-205ENST00000637896 1496 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFT1Q96AA3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFT1Q96AA3 RNU6-629P-201ENST00000384061 103 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 U3.22-201ENST00000391120 215 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AIMP1P1-201ENST00000418670 937 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC068287.1-201ENST00000430283 295 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AL358472.1-201ENST00000431295 329 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AL138878.2-201ENST00000440581 1241 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 RPS4XP4-201ENST00000443195 763 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 MTATP6P26-201ENST00000445926 662 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 RPL18AP17-201ENST00000455326 198 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 snoU109.4-201ENST00000458953 143 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 SNORD11.1-201ENST00000459482 85 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 HMGB1P25-201ENST00000468402 607 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC041039.1-201ENST00000485656 536 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 RPS23P1-201ENST00000491662 432 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC021146.5-201ENST00000503544 545 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC020699.1-201ENST00000505161 445 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC108475.1-201ENST00000507880 950 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 RNU6-311P-201ENST00000516224 102 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 DUXAP5-201ENST00000529668 529 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFT1Q96AA3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC022968.1-201ENST00000567372 442 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC025627.2-201ENST00000576220 160 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AL161729.3-201ENST00000603533 673 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC025811.1-201ENST00000604312 472 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC097478.2-201ENST00000610572 514 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 AP002791.1-201ENST00000623291 381 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC040168.1-201ENST00000623594 991 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 AC068787.1-201ENST00000623908 691 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
RFT1Q96AA3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RFT1Q96AA3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFT1Q96AA3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms