Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZNF962P-201ENST00000443465 3140 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 A2MP1-204ENST00000566278 4130 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AL022578.1-201ENST00000439330 1433 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 OR11H4-201ENST00000315409 1082 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RNU6-769P-201ENST00000384407 104 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MIR3065-201ENST00000390137 79 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RNU6-952P-201ENST00000391164 108 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MTND1P23-201ENST00000416931 372 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 OR8F1P-201ENST00000425243 930 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RPEP3-201ENST00000425462 676 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AL359265.2-201ENST00000434367 631 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 SBDSP1-204ENST00000453858 737 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RN7SL809P-201ENST00000482040 297 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC090453.1-201ENST00000495560 436 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC006499.6-201ENST00000511169 607 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RNA5SP154-201ENST00000516193 111 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RN7SKP244-201ENST00000516513 307 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 OR5AP1P-201ENST00000529730 940 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC022878.1-201ENST00000530684 149 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC069240.1-201ENST00000548774 375 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 EEF1B2P4-201ENST00000551398 348 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MIR4270-201ENST00000581799 70 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC069061.3-201ENST00000582254 823 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC008782.1-201ENST00000603386 430 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AL022154.1-201ENST00000604698 785 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 BCRP9-201ENST00000605312 388 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MIR432-201ENST00000606207 94 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC010857.1-201ENST00000606398 594 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC024941.1-201ENST00000612250 334 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC091834.1-201ENST00000614543 472 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 U4.5-201ENST00000617137 123 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MIR6864-201ENST00000617935 70 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 MTND5P28-201ENST00000438005 1594 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 AC005332.5-201ENST00000591222 2919 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 PHKBP1-201ENST00000450951 1951 ntBASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4AQ8WYN0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.69
ATG4AQ8WYN0 OR11H5P-202ENST00000641612 1325 ntBASIC4.46□□□□□ -1.69
ATG4AQ8WYN0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4AQ8WYN0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4AQ8WYN0 AC011266.1-201ENST00000624119 3569 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 OR4G2P-201ENST00000328113 903 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RNY4P24-201ENST00000362735 96 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RNU6-533P-201ENST00000384144 107 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RNU6-809P-201ENST00000384461 107 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC016769.3-201ENST00000396562 315 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC022028.1-201ENST00000412054 408 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 HMGB3P23-201ENST00000414981 585 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 TMSB10P2-201ENST00000416049 131 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 MRPS10P2-201ENST00000431226 381 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 MTND3P21-201ENST00000433774 331 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RPL23AP74-201ENST00000437246 471 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RSU1P2-202ENST00000437884 485 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AL590365.1-201ENST00000450788 243 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC098824.1-201ENST00000453565 980 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 RPL31P50-201ENST00000471002 296 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC108941.1-201ENST00000502853 530 ntBASIC4.46□□□□□ -1.7
ATG4AQ8WYN0 AC105252.1-201ENST00000503089 286 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms