Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TMEM248P1-201ENST00000510579 951 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 MTND5P4-201ENST00000514978 288 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC060788.1-201ENST00000521318 469 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 CENPUP2-201ENST00000555897 1186 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC233702.9-201ENST00000581528 203 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC099669.2-201ENST00000616549 437 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC073968.1-201ENST00000618594 637 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC004009.2-201ENST00000623016 728 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 AC139792.2-201ENST00000624218 587 ntBASIC4.33□□□□□ -1.72
HMGB4Q8WW32 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGB4Q8WW32 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RNU6-501P-201ENST00000364072 100 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RNU6-289P-201ENST00000364093 107 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RNVU1-3-201ENST00000364313 161 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RNU6-878P-201ENST00000384578 110 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RN7SKP266-201ENST00000410232 287 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RN7SKP33-201ENST00000410942 340 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 HMGB1P11-201ENST00000413899 637 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL831737.1-201ENST00000441288 271 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 HSPE1P28-201ENST00000443139 211 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL360221.1-201ENST00000445989 335 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 EPS15P1-201ENST00000448836 336 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AP000942.1-201ENST00000463969 747 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC108751.2-201ENST00000469993 231 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 UBTFL6-201ENST00000477929 1024 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RPL21P103-201ENST00000479921 488 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC108064.1-201ENST00000513791 460 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AF186190.1-201ENST00000517470 480 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC068587.4-201ENST00000533893 186 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC007115.1-201ENST00000546853 234 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC090186.1-201ENST00000605991 572 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AL391497.1-201ENST00000608671 547 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 FAM27D1-201ENST00000612308 341 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC011939.3-201ENST00000613686 466 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC139713.2-215ENST00000641428 5037 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 DHX9P1-201ENST00000436565 3076 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB4Q8WW32 PABPC1P9-201ENST00000426076 1612 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 AC097714.1-201ENST00000511272 1647 ntBASIC4.32□□□□□ -1.72
HMGB4Q8WW32 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL390237.1-201ENST00000404226 1415 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RNU6-339P-201ENST00000384310 107 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RPS24P12-201ENST00000402084 394 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MIR320C1-201ENST00000408566 88 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MTCO2P5-201ENST00000422621 426 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 CYCSP46-201ENST00000423569 204 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms